Hippoglossus hippoglossus (Atlantic halibut): 117775388
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Entry
117775388 CDS
T07778
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117775388
Membrane trafficking [BR:
hhip04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
117775388
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
117775388
NCBI-ProteinID:
XP_034464374
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Position
15:12271867..12276855
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AA seq
941 aa
AA seq
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MAGFVLEQLSDFGDFIGGTELGEALEAAHHGLSDVRMSPDGRHVHVILRKPKAGLVTFDK
YVRAQPVHNQKKLDLCATRAVPIVDVLYLDHNNNNNNHSSSSSRDAVAVVYENGKAEFWR
FQEGKASWHLLQTSDLCNSPRARVVSVCVCANLIIWCEERPPSESSPALGSTRNKFRYCV
CRRDFEVEEGAVSLGGVKIALHNNPKFTLVSSGEYVHLLPDLKVKPLLSISKLFLSWSPR
QDSFRISTTCKNTALKKLSAKESDFKRLVTDSLGFLSTLEPPEIYDVSPTGCGGLLLLLS
TGWLCLLQKDGMLRQLYKQADNCLAKYGTHTSLCMYQDTVALLVGQNLHLIDMNSGRELE
KIVLKREGVLYANQADRQTPHLLSENGLFVVVNKETDSRDRNYKVKPSDISRAECIHPGA
LLVEAVFEEACKYYQQRSLSSTQLTVDTLKKGGRFQAPISLASILGNYISTGSKQKGAEV
SQNGGGGCMAGQDKLMGSLEAELKALVSLEELKGSLVRGSVKEVEAVCEILVEKEVARLL
SLSELDKEPLLYLNSIFSIFPCQAWRAAQAALQIHHNGEGTLSSSAPTDVWKTVLGPASA
SRSPAALRLSSGGPRQNHSPKGDRTANCNVKSSSSTSPASLPVFELLCQSVFHFQPSWLP
KFLELAQQQQGSAGLGLSLASSSWNFSGGRGREGGENNVPLYKRALGVLSSLCSDGEQQQ
NLEVELLLVSGRPNAILQAMRVLVAKQKWERVMQVAETFCKPSPLLNKEIFTTLLCEVAH
HRELDPYLDLLWTLCPEDLTVTTIINLVLKSLPSPNTPSSSTSSSSFSMSTTASSSPAPF
ADSHSNQLTIGLLKPLLRKVLQRETKPSQHYADILQSPLFPPPAPPRQPAEQPGNVADPS
TDLGGNISPSLLTETPEQQSSTHTTVQRATVTIPANPFCFT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttcgttctggagcagctgtctgatttcggggacttcatcggcggcacggag
ctgggcgaggctcttgaagcggctcaccacggtctgtcggacgtccgcatgagccccgac
ggtcgtcacgtccatgtcatcctccgaaagcctaaagccggtctcgtgacttttgacaag
tatgtaagagcgcagccggtccacaaccagaagaagctggatctgtgtgcgacccgagct
gtgcccatcgtggacgttttgtatctggatcacaataataacaacaacaaccacagcagc
agcagcagtagagatgcggtggccgtggtgtacgagaacggaaaagcggagttctggagg
ttccaggagggcaaagcaagctggcacctcctgcagacctcggacctgtgcaacagcccc
cgggccagggtggtctctgtgtgcgtgtgcgccaacctcatcatctggtgcgaggagcgg
ccgccctcagagagctccccggccctcggctccaccaggaataagttcagatactgtgtt
tgcagacgggacttcgaggtggaggagggggccgtcagcttgggaggggtgaaaatcgcc
ctccacaacaatcccaaattcaccttggtcagctcaggtgaatatgtgcaccttctgcct
gatttgaaggtgaaaccgctgttgagcatttctaagttgttcctctcctggtcccctcgt
caggattcctttaggatcagcaccacatgcaaaaacactgctctgaaaaagctttcggct
aaggagtctgacttcaagaggctggtgacggactctctggggtttttatcgactctcgaa
ccgcctgagatctacgacgtctcgcccacgggctgcggcggcctgctgctgctgctcagc
acgggctggctgtgtctcctgcagaaagacgggatgctgcggcagttgtacaaacaggca
gacaactgcctggcaaagtatgggactcacacgagcctctgcatgtaccaggacacggtg
gcgctgctggtgggacaaaacctgcatcttatagacatgaactctggcagggagctggag
aagattgtgctgaagagagaaggggtgttgtatgcaaaccaggctgatagacagaccccc
cacctgctctcagaaaatggactttttgtggtggtgaacaaggagacagactccagagat
cgtaactataaagtgaaaccgtctgatatcagtagagccgagtgtattcatcctggagcc
ctcctggtggaggctgtttttgaggaggcctgtaaatactaccagcagaggagcctgagc
agcacccagctcactgttgacacgctgaagaaaggaggcagattccaggctcctatctct
ttagcctccatcctcgggaactacatcagcacagggtcgaagcagaagggagccgaggtg
tcccagaacggaggaggtgggtgtatggcagggcaagacaagctaatgggctctcttgag
gccgagctcaaggccctggtctctctggaggagctgaaggggagtttagtgaggggaagt
gttaaagaggtggaggcagtgtgtgaaattctggttgagaaagaagtagccagactgctg
tcattgtccgagctggataaagagcctctgctttacctcaactccatcttcagcatcttc
ccgtgccaggcgtggagggcggcacaggctgccctgcagatacaccacaacggggagggg
actctgtccagcagcgctccgacagatgtgtggaaaactgtcctgggtcctgcttcagcc
tccaggtcccccgccgccctcaggttatcaagtggcgggccaagacaaaaccacagccct
aaaggtgatcgcacagcaaactgtaatgtcaaatcttcaagctccacttccccagcttcc
ctccctgtgtttgaactcctctgccaatcagtttttcacttccagcccagctggctgccc
aagttcctcgagctcgcccagcagcagcagggttcagccggcctgggcctgagtctggcc
tcgtcctcgtggaacttctctggcgggagaggcagggagggcggggagaacaacgtgccg
ctctataaacgagccctgggcgtcttgtccagcctgtgctcggacggagaacagcagcag
aacttggaggtggagctgctgctagtcagcgggcggcccaacgccatcctgcaggcgatg
agggtcctcgttgccaagcagaagtgggagcgggtcatgcaggtggccgagacgttctgc
aaaccgagtccgctgctcaacaaggagattttcactactctgttgtgtgaggtggcccac
cacagagaactggacccatacctggaccttttgtggactctgtgccctgaggacctcact
gtcaccaccataatcaacttggtgctgaaaagcctcccctcccctaacaccccttcctca
tccacctcctcctcttccttctccatgtccactacagcctcctcatccccggctcccttt
gcggactcccacagcaaccagctgaccatcgggctgttgaaacctctcctgagaaaagtc
cttcagcgggagaccaagcccagccagcactacgctgacatcctccagtcccctctgttt
cctcctccagcacctcctcgtcagcccgcggagcagccagggaacgtcgcagatcccagc
acagacttgggcggcaacatatccccttctcttctcacagaaacacctgaacagcagtcg
tccacacacacaactgtgcaaagggcgactgtgacaatacctgctaacccattttgcttt
acataa
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