Hippoglossus hippoglossus (Atlantic halibut): 117775951
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Entry
117775951 CDS
T07778
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04060
Cytokine-cytokine receptor interaction
hhip04672
Intestinal immune network for IgA production
hhip04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117775951 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117775951 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117775951 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hhip04052
]
117775951 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
hhip00536
]
117775951 (cxcl12a)
Cytokines and neuropeptides [BR:
hhip04052
]
Cytokines
Chemokines
117775951 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
hhip00536
]
Heparan sulfate / Heparin
Chemokines
117775951 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
DEAD_2
B12D
Motif
Other DBs
NCBI-GeneID:
117775951
NCBI-ProteinID:
XP_034465425
LinkDB
All DBs
Position
15:complement(12659204..12665666)
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AA seq
98 aa
AA seq
DB search
MDVKVLALVAALTVVTYAPPAQAKPISLVERCYCRSTVNNLPRSYIRELRFINTPNCPFQ
VIAKLKSSKEVCVNPEVRWLKQYMRNAINKMKKNKKAN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaagtgttggcactcgtggctgcgctcactgtggtgacatatgcgcctcca
gctcaagcaaagcccatcagcctggtggagagatgctattgccgctcgacagttaacaac
cttccacggagctacatccgagagctcaggttcatcaacacgcccaactgccccttccaa
gtcattgccaagctgaagtcaagcaaagaggtgtgtgtgaacccagaggtccgctggctg
aagcagtacatgaggaacgctatcaacaagatgaagaaaaacaagaaggccaactga
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