Hippoglossus hippoglossus (Atlantic halibut): 117777991
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Entry
117777991 CDS
T07778
Name
(RefSeq) zinc finger protein GLI2-like isoform X1
KO
K16798
zinc finger protein GLI2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117777991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117777991
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
117777991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
117777991
NCBI-ProteinID:
XP_034469024
LinkDB
All DBs
Position
2:complement(10562182..10613606)
Genome browser
AA seq
1389 aa
AA seq
DB search
METSASRDKKDKMDVSGFGDLPKKPSLLETRAPPHHMFPTFHTPIPIDMRHHEGRYHYEP
HALHAMHGPVGLTGSPVISDISLIRLSPGAVATGDSPFSPPHPYVNPHMEHYLRSVHGSP
TLSMIAAARGLSPADLAHEHLKERGLFGLPPPPPGASPAEYYHLMASHRSPYSELLMHGA
GAAAGAHLSDYITPIDVSRFSSPRLTPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVA
YINNSRSSSAASSSYGHLSVGGLSPSFPFPHPINPMAYQHLLSQQRGLSAFGHTPPLIQP
PPAFSSRQPGLGLSSLSASVHHNDLMSKNHGSDSAVSSTVDPMITKRSKVKSEAEGLRPL
SPCSPNQHGSSLDLKDDADRDDCKQEPEAVYETNCHWEGCSKEFDTQEQLVHHINNDHIH
GEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLENLKTHL
RSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKH
VKTVHGPEAHVTKKQRSDVPPRPPAPRENGENETGPRIQREDAMSDNGSPRGMDDYLHVK
SIKTENSVVYQSSPGGQSSCSSEPSPLGSATNNDSGVEMAAHSGGSLGDLSTLDELPFVE
SLGFEDSSGGVAAVGLHFRKQLGTSQLLEHLKKEKLKTVRDSCRWANNPAPPVLGIKLPP
IPASGFLLESPSMGGGPMSFPGSGLSKLSSGKPTLLENLSERRDSTCSTLSSVYTLSRRS
SGISPCYSSRRSSQTSQFSANRPSNLSSADSYDPISADLSRRSSQTSHCGGSSGGAGVYR
GVGLASPLSLTPAQHYHLKAQYAAATGGAPPTPLPYLDQMCLKTHTALYGDPQERPTPKG
LPYRQYSSYNTRSLMPHEAPSHIPRRASDPVRRVTTDQPQLQRYNSIGALNRGVTVQPCP
PPAADRHRSAQHGCLRSDGHQRYSYSHRPPSISENVTMETGEEDLTLPDFITDGDTNCRA
SANPQHFQGNLPQQSYYQRRMAVVSPGQQPQKCSSAPRDNGDNLPVSGQVRGNLAVLQQN
HNFGSLYNHLSSNQQTNTEPGANCFRQQRLQMSSNLNEAIITQRRFSEGVGPYDNNGNAP
YPRCSNTAGADGGSTCKQEPDDEEPVDMHFADAGFQPVRVKIEDCDGPFLISDQQNCNRT
SQNPLHTVNQSYVRPRPPTEPRPLHRHHSGPKLMQHTRNQSNPEVVSRLFSDDNALYYTG
QIQVFESNRNCDLQVSPVVNVPPFENDAASPGSGGSPASRTLECDAALEQTQIDFDCMLD
DGDHSSVMSGTLSPGLLQNLSRSSSRLTTPRNSVTLPSVPTGTGNMAIGDMSSLLTALAE
ENKFLNLMP
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcggcgtcgagagacaaaaaagacaaaatggatgttagcgggttcggagac
ctcccgaagaagccttccctgctggagacgagagcccccccccaccacatgttccccacc
ttccacacgccgatcccgatcgacatgcgccaccacgagggacgctaccactacgagccg
cacgctctgcacgccatgcacggcccggtgggtttgaccggcagccccgtcatctccgac
atctccctcatccgcctctcgcccggcgccgtggcgaccggcgactccccgttcagcccg
ccccacccgtacgtcaacccccacatggagcactacctgcgctccgtgcacggcagcccc
acgctgtccatgatcgccgccgccagaggactcagcccggccgacctggcccacgagcat
ctgaaggagcgcgggctgttcggcctcccccctcctcctccgggggccagcccggcagag
tactaccacctgatggcgagccaccgcagcccctacagcgagctgctcatgcacggggcc
ggggccgcggcgggggcccacctgtccgactacatcacccccatcgacgtgtcccggttc
tccagccccagactgacgccccggctgagcaggaagagagctctgtccatctcgccgctg
tcagacgccagcatcgacctgcagacgatgatccgcacctcgcccaactccctggtggcg
tacatcaacaactctcgctccagctcggcggccagcagctcgtacggtcacctgtcggtg
ggaggactcagtccgtccttccccttccctcatcccatcaaccccatggcctaccagcac
ctcctctcccagcagcgaggcctcagcgccttcggacacactccgcccctcatccagccg
ccgcccgccttctccagccgccagccgggcctgggcctgtcctcgctgtcggcgtccgtc
caccacaacgacctgatgtcaaagaaccacggcagcgactcggccgtcagcagcacggtc
gaccccatgatcaccaagaggtcaaaggtcaagagcgaggcagagggactgaggcctttg
tccccgtgttccccgaaccagcacggcagctcgttggacctgaaggacgacgcggaccga
gacgactgcaaacaggagccagaggccgtttacgagaccaactgccactgggagggctgc
agcaaggagttcgacacgcaggagcagctggtgcaccacatcaataacgaccacatccac
ggagagaagaaggagttcgtgtgccgctgggacgagtgttctcgggagcagaagcccttc
aaagcccagtacatgctggtggttcacatgcgccggcacacgggggagaaaccacacaag
tgcacgttcgagggctgctgcaaggcctactcccgtctggagaacctcaaaacacacctc
cgctcgcacaccggcgagaagccgtacgtctgcgagcacgagggatgcaacaaggctttc
tccaacgcctcggaccgagccaagcaccagaaccggacgcactccaacgagaaaccctac
gtgtgcaagatcccgggctgcaccaagcgatacaccgaccccagctccctcaggaagcac
gtgaagacggtccacgggcccgaggcgcacgtcaccaagaagcagcgcagcgacgtgccg
cccaggccgccggcgcccagggagaacggcgagaacgagacggggcccaggatccagaga
gaggacgcgatgtcggacaacggctcccccagaggcatggacgactacctgcacgtgaaa
tccatcaagacggagaactcggtggtgtatcagtccagccctggcggtcagtcatcatgt
agcagcgaaccatcaccacttggcagcgccaccaacaatgacagtggagtagaaatggcg
gcgcacagcgggggaagcctgggggacctcagcaccctggacgagctgcccttcgtggag
tccttgggatttgaggattcctctggcggagtcgcggcggtcggcctccacttccggaag
cagctcggcaccagtcagctcctggagcatctgaagaaggagaagctgaagacagtgagg
gactcgtgtcggtgggccaacaacccagcccccccggtcctcggcatcaagctcccaccc
ataccagcaagcgggttcctcctggagagtccaagtatgggtggaggtccgatgtccttc
cctggttcaggcttgagtaagctgagctctggaaaaccaacgctactggaaaacctgtcc
gagcgccgggacagcacctgcagcaccctgagctcagtttacaccctcagccgccgctcc
tcgggcatctccccctgctactccagccgccgctccagccaaacctcacagttcagtgcc
aaccgccccagcaacctcagctcagctgactcctacgaccccatctccgccgacctctcg
cggcgctccagtcagacgagccattgtgggggaagcagcggaggagcaggcgtgtacaga
ggggtggggctagccagccccctcagcctgaccccagcccagcactaccacctcaaggcg
caatatgcagctgccactgggggtgcaccacctacccctcttccatacttggaccagatg
tgtctgaagacccacacagctctttacggggacccccaggaacgccccacccctaaaggc
ctcccctacaggcagtacagcagctacaacacgaggagcttgatgccccacgaggctccg
tctcacatcccccgccgagccagtgaccctgtgagacgagtgaccacagaccagcctcag
ctgcagcgctacaacagcataggggccctgaacaggggagtgaccgtgcagccatgtcca
cctcctgcagcagatcgccaccgttcagcccagcacggctgcttgaggtccgatggtcac
cagcgctactcgtacagccatcgaccgcccagcatttctgagaacgtcaccatggagacg
ggcgaggaggacctgacgctgcctgacttcatcaccgatggagatacaaactgcagagcg
tcggccaatccacagcatttccaaggaaacctcccgcagcagtcgtactatcagagaaga
atggccgtcgtgagtccagggcagcaaccacagaagtgttcatcagcaccgagggacaac
ggggacaacctcccggtctctggccaggtccgagggaacctggccgtcctccagcaaaac
cacaactttggatccctgtacaaccatctgagctccaaccagcagacgaacactgaacca
ggagcaaactgcttccggcagcagagactccagatgtcgtccaatctgaacgaagccatt
atcactcagcgtcgattcagcgaaggggtcggtccctatgacaacaacgggaacgccccc
tacccgaggtgcagtaacacggcaggagcagacgggggctccacctgcaaacaggagccg
gatgacgaggagccggtcgacatgcatttcgctgacgctggatttcagcctgtgagagtt
aagattgaggactgtgacggacccttcctgatttcagatcagcagaactgtaacaggact
tcccagaatcccttgcacactgtgaaccagagctacgttcggccgaggccaccaacagaa
cccagacctctacacaggcaccattcagggcccaagttgatgcagcacacaaggaaccag
agcaacccagaggtggtttccagattattctctgatgacaacgctttgtactacacggga
cagattcaagtgtttgagtccaacaggaattgtgaccttcaggtttctcctgtggtgaac
gtgcctccttttgaaaacgatgcagcatctcccggttccggtggaagcccggcgtccagg
actctggagtgtgacgcagccctggagcagacgcagatagactttgattgcatgctggac
gacggggatcactccagcgtcatgtcgggaactctgagtccgggtttgctccagaatctg
tcccggagttcctctcgcctgacgacgcccaggaactcggtgacgctgccctcggtgccg
acggggacggggaacatggccatcggggacatgagctcgctgctgactgctcttgccgag
gagaacaagttcctgaacttgatgccgtag
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