Hippoglossus hippoglossus (Atlantic halibut): 117778858
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Entry
117778858 CDS
T07778
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04514
Cell adhesion molecules
hhip04520
Adherens junction
hhip04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117778858
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117778858
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117778858
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117778858
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117778858
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117778858
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117778858
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
Type II RPTP family
117778858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
Interfer-bind
ig
Tc-R-P
PTP-SAK
V-set
DSPc
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Ig_C17orf99
KIAA1549
Motif
Other DBs
NCBI-GeneID:
117778858
NCBI-ProteinID:
XP_034470590
LinkDB
All DBs
Position
17:complement(18891467..19051004)
Genome browser
AA seq
1921 aa
AA seq
DB search
MVPNIHLAVPLLPRGALLFLLLFSCMVFSSVAESMPSFVKSPEDQTGISGGVASFVCQAT
GDPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSAGEIN
TSAKLTVLEENQVPHGFPTIDMGPQLKVVEKTRTATMLCAAGGNPDPEITWFKDMLPVDI
SSSNGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAMNSAGTRYSSPANLYVRVRRVP
PRFSIPPTNQEVMPGGSINLTCVAVGSPMPYVKWTTGQVELTKEEEMPLGRNVLEVTNIR
VSANYTCVAMSSLGIIEATAQVTVKALPKPPASLIVTETTATSVTLTWDSGNPEPVSYYM
IQYRAKSSDNGFQEVEGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETRTGEQ
APSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDLTAPLSAWQKHNTDDSS
LTTISGLTPDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELDNRIMLT
WLWPVQGPITKYELQYWEAGSDNKIHVTFNPAGSHAVDALKPDTLYHFSLAARSEMGLGV
YTQPIEARTAQSTPSAPPQEVHLVSLSSTSLKVSWVAPPAASRHGAIVRYTVSYQALAGE
DTERHEVTGIGADATSYVLVGLEKWTEYQVWVRAHTDVGPGPESAPVKMKTKEDVPGAPP
RKLEVEAINSTAIRVTWKPPLQGKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALPEAQW
NIEESTEHEAIIAGLHSETTYSVTVAAYTTKGDGARSKAKVITTTGAVPGRPTMMISTTM
ENTALIQWQPPKDMVGELMGYQLQYKRTDEETFTSRELRKIDDHYTVTGLHKGATYIFRL
SARNRAGIGEAYVKEISTTEDVPAGFPFNLQVTGLTQSSTQLTWEPPLVAERNGKIVHYV
VVYRDINSQQNTTNRTSDTHMTILGLNPDTTYDIRVQAYTSKGAGPLSPSIQSRTMSNDF
PTLNFGVKAVMKTSVLLSWDLPANYKPQVPFKILYNQQSVEVQGNLKRKLISQLQPDTDY
SFVLTSRGNIAGGLQQQVSIRTAPDLIKTKPSTHQAEGGKMTIELPKVQTTTRVRWYYIV
VVPVSQSQRQWKNPDEMDLDELLKSSEGPVLRRRRHLDSSKPYIAAKLESLPASFTLGDE
KRYSGFYNKPLTSPQEYLCFVLAMLRSDGTDNAANYMTFSASPYSDPIQVAASMSEQPEM
LWVMGPVLAVVLIVIIVIAILLFKNSKQERKRASPLPKDDHSGGVKDSLLANSSDPVEMR
RLNYQTPGPSSHRCPNTPRMREHPPITVVDLSDHIERLKANDGLRFSQEYESIDPGQQFT
WENSNMEVNKPKNRYANVIAYDHSRVVLTSVDAVPGSDYINSNYIDGYRKQNAYIATQGP
LPETLSDFWRMVWEQRSNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVELA
TYSVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILSFLRRVKSCNPPDAGPMVV
HCSAGVGRTGCFIVIDAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLE
AATCGNTEVLARNLYAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISANLPCNKF
KNRLVNIMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYLATQGPLAETTEDFWRM
LWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTD
ARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRT
GVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYA
T
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaatattcacctggcagtgcccctcctgcccagaggggcgttgctgttcctg
cttctcttcagctgcatggtgttctcctctgtggcagagagcatgccaagtttcgtgaaa
tccccagaggaccagacgggtatctcgggcggagttgcatcgtttgtgtgccaggccact
ggggaccctaaacccagaatcacctggatgaagaaaggcaagaaagtcagctcccagcgc
tttgaggtgattgagtttgatgacggttcgggctccgtactgcggatccagccactgcgc
acacaccgagatgaagccatttacgagtgcacagccaccaacagcgctggcgagatcaac
accagtgctaagcttacagtgcttgaagagaaccaggtcccccatggcttccccaccatc
gacatgggtccccagctgaaggtggttgaaaagacccgaactgccaccatgctgtgcgct
gccggtggaaacccagacccagagatcacctggttcaaggacatgcttcctgtggacatc
agcagcagcaacgggcgaatcaaacagctccgctcaggtggtacaccaattagaggagct
ctgcaaattgagaacagcgaggagtccgaccaggggaaatatgaatgcgttgccatgaac
agtgccgggactcgttactcttctcctgccaatctctacgtacgagtgcgaagagtccca
ccaagattctccattccgcccaccaaccaagaggtgatgccaggcggcagcatcaatctg
acgtgcgtggcggtgggctctccgatgccctacgtcaagtggacgacgggccaggtggag
ctgaccaaggaggaggagatgccgctgggacgcaatgtgctggaggtcacaaacatccgc
gtgtcggccaactacacgtgcgtggccatgtcttctctgggcatcatcgaagccaccgct
caggtcactgtcaaagccctgccaaagcccccagcctccctcattgtgacagagaccaca
gccaccagtgtgacactcacctgggactccgggaacccagaaccagtgtcctactacatg
atccaatacagagccaagtcctcagacaatggcttccaggaagtggaaggtgtggcgacc
acccgttacagcatcggcggacttagcccctactccgagtacgagttccgcgtcatggct
gtcaacaacattggccgcgggccgcccagcgaccccgtggagacacgcaccggtgaacag
gccccctcctcacctccgctgcacgtccaggcgcgcatgctaagtgccagcacaatgctg
gtccagtgggaaccgcccgaggaacccaatgggcaaatcaggggctatcgagtgtactac
agctcggacctgacggctccgctcagcgcctggcagaaacacaacacagatgacagcagt
ctgaccaccatctcaggcctgactcctgatatcacgtacagcctgcgggtgctgggcttc
acctccgttggtgacggaccaccctctgatgtcctgcaagtgaaaacgcagcagggagtc
cctgcgcagccgtccagctttgaggccgaagccgagctggacaaccgcatcatgctaaca
tggctgtggcctgtgcagggccccatcacaaagtatgagctgcagtactgggaggctggc
tcagacaacaagatacacgtgaccttcaacccggcgggctctcatgccgtggatgctcta
aagcctgataccttgtaccacttctcgctggccgcccgttctgagatgggtttaggcgtt
tacacacagcccatcgaggcccgcaccgcccagtccaccccctccgctccccctcaagag
gtacacctggtcagcctgagctccaccagtctcaaggtgagttgggtggcgccgcctgcc
gctagccgccacggcgccattgtgcgctacacagtcagctaccaggccctggctggagag
gacacagagcggcacgaggtgactggcatcggtgcagacgccaccagctatgtgctggtg
ggcctggagaagtggactgagtatcaggtgtgggtgagggcacacactgatgtgggcccg
ggccctgaaagtgccccagtgaagatgaaaaccaaagaggatgtgccaggagcacccccc
aggaagctggaggttgaggccataaactccacagccatccgggtcacctggaagccgccg
ctgcagggcaagcaacacggccaaatccgaggataccaggtcatcttctcccggcttgaa
aacggcgaacctcgaggccagcctaatatcatggacgttgctctgccagaggcacagtgg
aatattgaggagtccaccgagcatgaggccatcattgccgggctgcattctgagaccacg
tactctgtcactgtagcagcgtacaccaccaagggggatggagcccgtagcaaagctaaa
gtcatcaccacgacgggggcagtgccaggcaggccgactatgatgatcagcaccaccatg
gaaaacacagcgctgatccagtggcagccacctaaggacatggtgggtgagctgatgggc
taccagctgcagtacaagcgcaccgatgaggaaacctttacctcacgtgaactgaggaag
atcgatgaccactacactgtcaccggactgcacaaaggcgcgacctatatcttccgcctc
agtgctcgcaatcgcgcaggcattggcgaggcctacgtgaaggagatcagtaccaccgaa
gacgtgcccgcaggcttccccttcaacctacaagtaacaggactgactcagtccagcacc
cagctgacctgggagccgccgctggtggcagagaggaacggcaaaatcgtccactacgtg
gtggtgtacagggacattaacagtcagcagaacaccaccaaccgcacgtccgacactcac
atgaccatcctgggccttaatcctgacaccacctacgacatccgggtgcaggcgtatacc
agcaagggcgctggacccctcagcccgagcattcagagcaggaccatgtcaaacgacttt
ccaacactaaactttggcgtcaaagctgtgatgaaaacatccgtccttctcagctgggat
ctgccagcgaactacaaaccccaagtgccttttaagatcttatataaccagcaaagcgtg
gaagtgcagggaaacctgaagaggaagctgatttcgcagctgcagccggacacagactac
tcctttgtgctgacaagcaggggcaacattgctggtggtctgcagcagcaggtgtccata
cgcactgctcctgacctgatcaagaccaagcccagcacacatcaggctgagggcggcaag
atgaccatcgagctgcccaaagtccagaccaccacacgcgtcaggtggtactacattgtg
gtggtgccagtatcccagtcacagcggcagtggaagaatccagacgagatggacctggat
gagctgctcaagtcaagcgaaggtcctgtcctgaggcgtcggcgtcacctggattcctcc
aaaccttacattgctgctaaactggaatcgctgcccgccagcttcaccctgggggatgag
aagaggtacagcggtttctacaacaagcctctgaccagtccacaggagtacctctgcttc
gtcctggccatgctccgatccgacgggacggacaacgctgcaaattatatgacgttttca
gccagtccctactcagacccgatccaagtcgctgccagtatgagtgagcagccggaaatg
ttgtgggtcatgggcccagtattggccgtggtcctcatcgtcatcatcgtcatcgccatc
ctgctctttaagaacagcaaacaggaaaggaaacgggcatctcctctacccaaagacgac
cactcaggtggggtgaaagactccctgctggccaattcctccgaccctgtggagatgaga
agactcaactaccagaccccaggtcccagctctcatcgttgccccaacactccaagaatg
agggagcacccgcccattactgtcgttgacctgtctgaccacatagagcgactcaaggcg
aacgacggcctccgtttttcccaggagtatgagtccattgatcctggccagcagtttacc
tgggagaactccaacatggaagtcaacaagccaaagaatcgctatgcaaacgtcatcgcc
tatgaccactccagagtggtgctcacctctgttgacgctgtaccaggcagtgactacatc
aattccaactacatcgacggctacaggaagcagaatgcctacatcgccacacaggggcct
ctgccagagacactcagcgacttctggaggatggtgtgggagcaaagatccaacaccatt
gtcatgatgacgagactagaggagaagtcacgggtgaagtgtgaccagtattggccatca
cgaggaaccgagacctacgggatgatccaggtcaccatgctggacactgtggagctggct
acttacagcgttcgtacattcgccctctacaagaacggctccagtgagaagagagaggtg
agacagttccagttcatggcctggccagaccacggagtaccagagtacccgacacccatc
ctgtccttcctgcggcgggttaagtcctgcaatcctccagacgcagggcccatggtggtc
cactgcagtgctggcgtgggcaggacaggctgcttcatcgtgatcgatgccatgctggag
cgcatgaagcacgagaagtccgtggacatctacggccacgtgacgtgcatgcgcgcccag
aggaactacatggtccagaccgaggaccagtacatcttcatccacgaagccctgctggag
gcggcgacctgcggcaacaccgaggtgctggcccgcaacctgtatgcacacatccagaaa
ctcacccagcccccgcccggcgagacggtcactgccatggagctggagttcaagagactg
gccaactccaaagcccacacgtcacgcttcatcagcgccaacttaccctgcaacaagttc
aagaaccgcctggtcaacattatgccttttgagtccacccgcgtctgcctgcagcccatc
cggggcgtcgagggctccgactacatcaacgccagctgcatcgatggctacagacagcag
aaggcttacctggccacccagggcccactggccgagaccaccgaggacttctggaggatg
ctgtgggagcacaactccaccatcgtcgtcatgctcaccaagctacgagagatggggcgg
gagaagtgtcaccagtactggccggcagagcgttcagccaggtaccagtactttgtggtg
gatccaatggctgagtacaacatgccccagtacatcctccgagagtttaaagtcacagat
gccagggacggccagtccagaacaatccgccagttccagttcactgactggcccgagcaa
ggagtgccaaaaactggagagggcttcattgatttcatcggacaagttcacaaaaccaag
gagcagtttggacaagacggaccaatcactgtacactgcagtgccggggtgggcaggacc
ggagtcttcatcaccctcagtatcgtgctggagaggatgaggtacgagggcgtggtcgac
ctcttccagacggtgaagacacttcgcacccagcggcctgccatggtgcagacggaggac
cagtaccagttgtgctacagggcagcattggagtacctggggagctttgaccactatgca
acgtaa
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integrated database retrieval system
