Hippoglossus hippoglossus (Atlantic halibut): 117778885
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Entry
117778885 CDS
T07778
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like
KO
K20894
shank-associated RH domain-interacting protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04217
Necroptosis
hhip04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117778885
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117778885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117778885
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
117778885
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
CATSPERB_Ig-like
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117778885
NCBI-ProteinID:
XP_034470652
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Position
17:15556684..15566810
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AA seq
437 aa
AA seq
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MALSSGGWAPPAPVPASSSQQAACGGPAPTACCTTVLMSVRVSVCHSGIRPLCLPGAGSE
TLRLQLSMDPSRAGEFRLALRDTSGNRSVFIAEFDLRSVQYEVKSPRCHEMRLAAPPHDC
IRFNFRCDREAEEWATVVMSSLREAHRVANINTYESDARQNHTVAAMEQWSAASLPVTEE
LCLELARAIEAGDTQAASQHVSALARQKAVLTIQLSEKNYAEGEISLSVVVEDVSSSCCV
TVKVFPYMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQKDGDTAYLYLI
SARQARVTRQLFQQDLESALLAPPVPPGNGPISQDWRAYSTLPSRLPHNNQGGAGGGGGD
RPADIKDVLDLENLRLSDHTNKASKTQTEWACPSCTFINKLSRPGCEICATARPDTHIQQ
EKGRREERGEPGLSSSS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagctcgggcggctgggctcctccagccccggtgcctgcctcctcgtcccag
caggctgcctgcggcgggcctgcgccgaccgcctgctgcaccaccgtgctaatgtcggtc
cgggtgtcggtgtgccactccgggatccggccgctgtgtctccccggggcgggcagcgag
actctgcgcctccagctcagcatggacccgagccgggccggagagttccgcctggcgctg
cgagacacgagcggaaaccgcagtgtgttcattgccgagtttgacctgcgctcggtgcag
tatgaggtcaagtcccctcgctgccatgagatgcgactcgcggctccaccacacgactgc
atccgcttcaacttccgctgcgaccgggaggcggaggagtgggccacagtggtgatgtca
tcactcagagaggcacatagagttgcaaacattaacacgtacgaatcagatgccagacag
aaccatacggtagcagccatggagcagtggagcgctgcctcgctgccggtaactgaggag
ctgtgcttggagctcgccagggccatcgaagcaggcgacactcaagccgcttcccagcac
gtgtccgctctggctcgacaaaaagcggtgctgacgatccagctgtctgaaaagaactac
gcagaaggggagattagtctgtctgtggttgtggaggatgtttcgtcgtcctgttgcgtc
acagtgaaagtgttcccctacatgacggtagctgccctcaagcaacaggtgtttctcgag
tacggtttccatcctcgcgtgcagcgctgggtgatcggtcagtgtttgtgcaccgagccg
aggtcgttagcgtcgtacggggtgcagaaggacggggacacggcgtacctctacctgatc
tccgcccggcaggcccgcgttacccgccagctgttccagcaggacctggagagcgccctc
ctcgcccctcctgtccccccaggcaatggacccatctcgcaggattggagggcttatagc
acgctgccctcgaggctaccacacaacaaccagggcggagcaggaggaggcggaggcgat
agaccagctgatatcaaagatgtcctcgacttagagaatctgcgcctgagtgatcacacc
aacaaagccagtaaaacacagaccgagtgggcgtgtccctcatgcactttcatcaacaaa
ctgtctcgtccgggctgcgaaatctgtgccacagcccgaccagacacacacatccagcag
gagaaagggaggagagaggagcggggggagcctggtttgagcagcagcagctga
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