KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117779237
Entry
117779237         CDS       T07778                                 
Name
(RefSeq) LOW QUALITY PROTEIN: H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04145  Phagosome
hhip04514  Cell adhesion molecules
hhip04672  Intestinal immune network for IgA production
hhip05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117779237
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117779237
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117779237
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117779237
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hhip04147]
    117779237
Exosome [BR:hhip04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117779237
  Exosomal proteins of epithelial cells
   117779237
  Exosomal proteins of breast milk
   117779237
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 C2-set_3 Ig_3
Other DBs
NCBI-GeneID: 117779237
NCBI-ProteinID: XP_034471157
LinkDB
Position
18:16519287..16522105
AA seq 249 aa
MASFFLRFSLFFITVCAADGFRYCVVSTCEFNSTELNDIEFIQSYYYNKLEYITFRSSVG
KYVGINAHGEKNAERWNKGPEVVQMRAQKVDXYCLHNVGIYTESALTKSVKPSVRLHSVA
PPAGKHPAMLVCKVYDFYPKLIRVSWQRDGQEVTHEVTSTDELADGDWFYQIHSHLEYTP
RSGEKISCVVEHASLSKPLITDWDPSMPESERNKIAIGTSGLILGLTLSLAGFIYYKRKA
QGRILVPTN
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcttcattcttcctcaggttctccctcttcttcatcactgtctgcgcagcagatgga
tttcggtattgtgtggtaagtacttgtgagtttaactccactgagctgaacgacattgag
ttcatccagtcttactattacaacaaactggagtacatcacgttcaggagcagcgtgggg
aagtatgttggaatcaatgcgcatggagagaagaacgctgagagatggaacaagggtcca
gaggtggtccagatgagagctcagaaggtggacnnttactgcttacacaacgttggaatc
tacacagaaagtgctctgacgaagtcagtcaaaccctccgtcagacttcactctgtggcg
ccaccagctggcaaacatccggccatgttggtctgcaaggtctacgacttctaccccaaa
ctgatcagagtgagctggcaaagagacggacaggaagtcacccatgaggtcacttccact
gatgagctggcagacggtgattggttctaccagatccactcccacctggagtacacgccc
aggtctggagagaagatttcctgtgtggtggaacacgccagcctgagtaaacctctgatc
actgactgggatccatccatgcctgagtcagaaagaaacaagatcgccatcggaacctca
ggactgatcctgggtctgaccttatctctggctggattcatctactacaagaggaaggcc
caagggcgaatcctggttcccactaactga

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