Hippoglossus hippoglossus (Atlantic halibut): 117779365
Help
Entry
117779365 CDS
T07778
Symbol
sepsecs
Name
(RefSeq) O-phosphoseryl-tRNA(Sec) selenium transferase
KO
K03341
O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [EC:
2.9.1.2
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00450
Selenocompound metabolism
hhip00970
Aminoacyl-tRNA biosynthesis
hhip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117779365 (sepsecs)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117779365 (sepsecs)
Enzymes [BR:
hhip01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.2 O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase
117779365 (sepsecs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SepSecS
Beta_elim_lyase
Aminotran_1_2
Pyridoxal_deC
Motif
Other DBs
NCBI-GeneID:
117779365
NCBI-ProteinID:
XP_034471381
LinkDB
All DBs
Position
18:7799715..7811128
Genome browser
AA seq
485 aa
AA seq
DB search
MNSENFTLSEKIVSASYIRQGSQARRGHEQLIRHLLEQGKCPEEGWSESTVELFLNELAV
MDSNNFLGNCGVGEREGRVASSLVARRHYRLIHGIGRSGDIAAIQPKAAGSSLLNKLTNS
VVLDILKLAGVRSVASCFVVPLATGMSLTLCFLTLRHRRPKARYILWPRIDQKSCFKAMI
TAGFEPVVVENVLEGDELRTDLEAVERKVEELGADNILCVHSTTSCFAPRVPDRLEELAT
ICAKYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFDE
SFVQEISQMYPGRASASPSLDVLITLLTLGASGYKKLLSERKEIYLLLAQELKSLASAHG
ERLLHTPHNPISLAMSLDGLQADSDKAVTQLGSMLFTRQVSGARVIPLGKEQTISGHTFH
GFMSHSDAYPCPYLNAASAVGITREDVTLCIKRLDKCLKTLRKESNVAKSSSVVPPSRCD
DTPGE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcgaaaacttcaccctgagtgagaagatcgtgtcggcctcctacattcgacag
gggtctcaggcgcgacgcggccacgagcagctcatcagacacttgctggagcagggcaag
tgtccggaggagggatggagcgagagcaccgtagagctcttcctgaacgagctggctgtg
atggacagcaacaacttcctcggcaactgtggagtgggggagagggaaggccgggtggcg
tccagccttgtggcgagacgacattacaggttgatccatggcatcggtcggtcgggtgac
atcgccgctattcagcccaaagcggcaggatccagtctgctgaacaagctgaccaactca
gttgtgttggacatcttaaagctcgcaggtgtgcgcagtgtggcaagctgctttgtcgtc
cccttggcaacaggtatgagcttgaccctgtgcttcctgacccttcgtcatcggaggccc
aaggctcgctacatcctttggcctcgcatcgaccagaagtcctgtttcaaagccatgatc
acagcaggttttgaaccggtggtggtggagaacgttcttgagggcgacgagttgcgcacc
gacttggaagcagttgagcggaaggtcgaggagcttggcgccgacaacatcctgtgtgtc
cattcgacaacgtcctgcttcgccccgcgagtccctgacaggctggaggagctggccact
atatgtgccaaatacgacatcccccacatagttaacaatgcgtatggcgtacagtcgtcc
aaatgcatgcaccttatacaacagggggctcgtgttgggagaatcgacgcctttgtccag
agcttggacaagaacttcatggtaccagtaggtggcgccataatagcaggtttcgatgag
tcctttgtacaggagataagtcagatgtacccaggtcgagcttcagcctcgccctccctt
gacgtcctcatcaccttactgactctgggagccagcggctacaagaaactcctgtcagaa
agaaaggagatttatttgctcctggctcaggagctgaagagtctggcctctgcacacggg
gagagattgcttcacaccccacataaccccatttcactggccatgtctttggatggtctc
caggccgacagcgacaaagcagtgactcagctgggctccatgttgttcacccggcaagtg
tccggagccagggtaataccgctgggcaaggagcagaccataagcggccacactttccac
ggcttcatgtcgcactcagacgcgtacccctgcccctacctcaacgctgcctctgctgtg
ggcatcacccgagaagatgtgacgctgtgcatcaaacggctcgacaagtgcctgaagacc
ctgaggaaagagtccaatgtggccaagagcagctccgtggtgcccccatcccgctgcgac
gacacaccgggagaatga
DBGET
integrated database retrieval system
