Hydrogenobaculum sp. HO: HydHO_0890 Help Entry HydHO_0890        CDS       T02482                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism hho  Hydrogenobaculum sp. HO Pathway hho03030   DNA replication hho03410   Base excision repair hho03420   Nucleotide excision repair hho03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hho00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     HydHO_0890    03410 Base excision repair     HydHO_0890    03420 Nucleotide excision repair     HydHO_0890    03430 Mismatch repair     HydHO_0890  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hho03032]     HydHO_0890    03400 DNA repair and recombination proteins [BR:hho03400]     HydHO_0890 Enzymes [BR:hho01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      HydHO_0890 DNA replication proteins [BR:hho03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      HydHO_0890 DNA repair and recombination proteins [BR:hho03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      HydHO_0890    NER (nucleotide excision repair)     GGR (global genome repair) factors      HydHO_0890    MMR (mismatch excision repair)     DNA ligase      HydHO_0890   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       HydHO_0890 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia HHH PTCB-BRCT At2g29880_C Zn_ribbon_NUD Motif Other DBs NCBI-ProteinID:  AGG15209 UniProt:  M1RK51 LinkDB All DBs Position 826797..828899 Genome browser AA seq 700 aa AA seqDB search MNDKFFIDKTKEILKTYNLSPDKHPPKLSKEEAIKIIDTLRELINYHDYRYYVLNQPVIS DAEYDAIYKFLKSIEDTYPDLITPDSPTQRVSSDISSTFPQVKHLAPMLSLDNTYNEDDL RDFDRRVKELSGKEHIEYCVEPKYDGAGISLLYENDIFVRGATRGDGEVGEEITKNLKTI KTIPLRANFSKQGIRLLEIRGEVIINKDDFKKINEERMAENLPPYANPRNLAAGSIRLQD PQEVAKRPLTALVYQITYVEPANAMPKTHYEAIKMLHDLGFKTPFLDMKLCKNIQEVIDY CKYFESKRESLPYEIDGMVIKVNDISLYDELGFTSHAPRWATAFKFKAKQATTVILDVIF SVGRVGNITPVAKLEPVSLGGVTISSVSLFNEDFIREKDIHIKDTVIIERAGEVIPYVVS VVKEARPKDAKPIVFPEYCPSCGSKLVKAPGEVAWRCINISCPAQVVLRIRHFASKDAMD IKGLGEAVAQLLYDAKLVKNIADIYYLKFSDLVRLPRFAKKSAQNLIDAIEASKRRGLAR VLYGLGIRYVGLTTAKKLASYYKDIWSIAKAKEEDLRNIEDIGDIVARSIKEFFSLEQNI NTIKRLEEAGVLLKEVSEAVSNKLAGLQFVFTGTLSCCTREIAKQMVESLGATTSDSVTH HTSYLVVGQDPGATKLRKANMLGIKTISEEEFLKLLEDNK NT seq 2103 nt NT seq  +upstreamnt  +downstreamnt atgaatgacaaattctttatagacaaaacaaaagagattttaaaaacttataacctttct ccagacaaacatccacctaaactttccaaagaagaagccataaaaataatagacacgtta agagaactcataaattatcatgattatagatattatgtgttaaatcaacccgttatatca gatgccgagtacgatgctatttataaatttcttaaaagcatagaagacacttatcctgat ctcataactccagattcacctactcaaagagtatcttccgatatatcaagcacatttcct caagtaaagcacttagctccgatgctttctttggacaacacttacaacgaagatgacttg agagattttgatagaagagtaaaagaattaagcggaaaagaacatatagaatactgtgtt gaaccaaaatacgacggagctggtatatcgcttttatacgaaaacgatatatttgtaaga ggagccaccagaggagacggggaagtgggtgaggagattaccaaaaacctaaaaactatc aagacaatccctctaagggcaaatttttcaaaacaaggtattaggcttttagaaataaga ggagaagtcataataaacaaagatgactttaaaaaaataaacgaagagaggatggcagaa aacttacccccttacgcaaatccaagaaacttagcggctggctctataagacttcaagac ccccaagaagtagccaaaagacctctaacagcccttgtctaccaaataacatacgtagaa cctgcaaacgctatgccaaaaactcactacgaagctataaaaatgcttcatgatcttggt tttaaaacgccttttttagacatgaaactttgtaaaaatatccaagaggtcatagattac tgtaaatactttgaatcaaaaagagaatcactaccttatgaaatagatggaatggtgata aaagtaaacgatatatcactttatgatgagcttggatttacatcgcatgctccaagatgg gccactgcttttaaatttaaagcaaaacaagccactaccgtgatattagatgtgatattt agcgttggaagagtaggcaatataacaccagtggcaaaattagaaccagtatctttgggc ggggttaccatatcaagcgtttctttattcaacgaagattttataagagaaaaagatata cacataaaagatacggttatcatagaaagggctggtgaggtgataccttatgtggttagc gtggtaaaagaagcaaggcccaaagatgccaagccaatcgtttttccagagtactgccca tcttgtggttctaagcttgtaaaagcccccggcgaagtggcttggaggtgtataaatata tcctgcccagctcaagtggtgttaagaataaggcattttgcatcaaaagatgcaatggat ataaaaggtttaggggaagctgtggctcagcttttatacgatgctaaacttgtgaaaaac atagccgatatctactaccttaaattttcagatttggtaaggcttccaaggtttgccaaa aaatcagctcagaatcttatagatgccatagaagcttcaaaaagaagaggcctagcaagg gtgttatatggtcttggcataagatacgtagggcttaccactgcaaaaaaacttgcttca tattacaaggatatatggagtatagcaaaagccaaagaagaagacttaagaaatatagaa gatataggggatatagttgcaagaagtataaaagagttttttagtttggagcaaaatata aatacgataaaaaggttagaagaagctggtgtacttttaaaagaagtatctgaagccgta tctaacaagcttgccggtttgcaatttgtttttacaggtacactttcttgttgtaccaga gaaatagccaagcaaatggtagaatcccttggggccaccacatcagacagtgtaactcat catacgtcttatcttgtggtaggacaagatccaggtgctaccaaactaagaaaagcaaac atgctaggtatcaaaactataagcgaagaggagtttttaaagcttttagaagataacaag taa

DBGET integrated database retrieval system