KEGG   Helicobacter pylori Shi112: HPSH112_04105
Entry
HPSH112_04105     CDS       T02037                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hhp  Helicobacter pylori Shi112
Pathway
hhp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hhp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HPSH112_04105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhp03400]
    HPSH112_04105
Enzymes [BR:hhp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HPSH112_04105
DNA repair and recombination proteins [BR:hhp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HPSH112_04105
 Prokaryotic type
     HPSH112_04105
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S Ogg-HhH IZUMO DUF6744 HHH_8
Other DBs
NCBI-ProteinID: AFI01022
LinkDB
Position
831388..832038
AA seq 216 aa
MGLKRAKTYQKAQQIKELLLKHYPNQTTQLHHKNPYELLVATILSAQCTDARVNKITPKL
FEKYPSVKDLALASLEEVKEIIKSVSYSNNKSKHLINMAQKVVRDFKGVIPSTQKELMSL
DGVGQKTANVVLSVCFNANCIAVDTHVFRTTHRLGLSDANTPIKTEEELSDLFKDNLSKL
HHALILFGRYTCKAKNPSCGACFLKEFCVSKASFKA
NT seq 651 nt   +upstreamnt  +downstreamnt
atggggttaaaacgcgctaaaacttaccaaaaagcccaacaaatcaaagaattgctttta
aaacattaccccaaccaaaccacccaattgcaccataaaaacccctatgaattgctagtg
gctaccattttaagcgctcaatgcacggacgctagagtgaataaaataacgcccaagtta
tttgaaaaatacccaagcgtgaaggatttagccctcgcttctttagaagaagttaaagag
atcatcaaatccgtttcttattccaacaataaaagcaagcatttaatcaatatggcgcaa
aaagtggttagggattttaagggcgttatcccctctacgcaaaaagaattgatgagccta
gatggcgtggggcaaaaaaccgctaatgtggtgctttcagtgtgctttaatgcaaattgc
atagccgtagatacccatgtgttccgcacgactcaccgcttaggcttaagcgacgctaac
acgcccattaaaaccgaagaagaactcagcgatctttttaaagacaacctatccaaactc
caccatgccttaatcttgtttggccgctacacctgcaaggctaaaaacccctcatgcggc
gcgtgttttttaaaagaattttgcgtttctaaggctagctttaaagcgtag

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