Helicobacter pylori Shi417: HPSH417_01980
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Entry
HPSH417_01980 CDS
T02039
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr00540
Lipopolysaccharide biosynthesis
hhr01100
Metabolic pathways
Module
hhr_M00866
KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSH417_01980 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hhr01005
]
HPSH417_01980 (lpxC)
Enzymes [BR:
hhr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
HPSH417_01980 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
hhr01005
]
Lipid A
HPSH417_01980 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
DUF1507
Motif
Other DBs
NCBI-ProteinID:
AFH97549
LinkDB
All DBs
Position
391104..391991
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AA seq
295 aa
AA seq
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MKQTTINHSVELVGIGLHKGVPVKLVLEPLEENQGIVFYRSDLGVKLPLKPENIVDTKMA
TVLGKDNARISTIEHLLSAVHAYGIDNLKISVDNEEIPIMDGSALAYCMLLDEAGIKELD
APKKVMEIKQVVEVREGDKFVKIEPDSQLSLNFAIDFNHPVIAKQAHHFVFSKTAYKEQV
AKARTFGFLQEVNYLRSIGLAKGGSLNNCIVLDENSILNKEGLRCEKEFVCHKILDAMGD
LMVLGMPVMGKYTSFSGSHKLNSMLVKAILADAKNYEVLIATDPAKEFALQKAFA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaacaaccattaaccactctgtggaattagtagggataggcttgcacaagggc
gttcctgtgaagcttgttttagagcctttagaagaaaatcaaggcattgttttttaccga
tctgatttgggcgtgaagctccccttaaaacctgaaaacatcgtggataccaaaatggca
accgtgttgggtaaggataatgctagaatttctacgattgagcatttgctttcagctgtc
catgcgtatggtattgacaaccttaagatctctgtggataacgaagaaatccctatcatg
gatgggagtgctttggcttattgcatgcttttagatgaagcagggattaaggagttagac
gctcctaaaaaggtgatggaaatcaagcaagtcgttgaggttagagagggcgataaattt
gttaaaattgagccagacagccaactttctttgaattttgcgattgattttaaccatccg
gttatcgctaagcaagcccatcattttgtctttagtaaaaccgcttacaaagagcaagtc
gctaaagctcgcacctttgggtttttgcaagaagtgaattacttgcgatccattggtttg
gctaagggggggagcttaaataattgcatcgtgctggatgaaaacagcattttgaataaa
gagggtttgaggtgcgaaaaggaatttgtgtgccacaagattttagacgctatgggggat
ctaatggttttaggcatgcctgtgatgggcaaatacacttctttttcagggagtcataag
ctcaattccatgttggttaaagccattttggcggacgctaaaaattacgaagttttgatc
gctacagatccggctaaagaatttgcgttgcaaaaggctttcgcttaa
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