KEGG   Helicobacter pylori Shi417: HPSH417_02540
Entry
HPSH417_02540     CDS       T02039                                 
Name
(GenBank) CAG pathogenicity island protein T
  KO
K12097  cag pathogenicity island protein 12
Organism
hhr  Helicobacter pylori Shi417
Module
hhr_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhr02044]
    HPSH417_02540
Secretion system [BR:hhr02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPSH417_02540
SSDB
Motif
Pfam: Cag12 Nup54
Other DBs
NCBI-ProteinID: AFH97661
LinkDB
Position
512789..513631
AA seq 280 aa
MKLRASVLIGATILCLTLSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTP
FMVQVKLPNYKDYLLDNKQVVLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDF
YLQPTLNQKGVVMIASNYNDNPNNKEQPQTFDVLQGSQPMLGANTKNLHGYDVSGANNKQ
VINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
IFKNGNLNMQTKEEEVREKLQEERENEYLRNQIRSLLSGK
NT seq 843 nt   +upstreamnt  +downstreamnt
atgaaactgagagcaagtgttttaatcggtgcgacaattctgtgcttaactttaagcgcg
tgcagtaattatgcgaaaaaagtggtgaagcaaaagaaccatgtttatacgcctgtgtat
aatgaactgatagagaagtatagtgagatacccttaaatgacaaactcaaagacacacca
ttcatggtgcaagtgaagttgccaaattacaaggactatttgttggataataaacaagtt
gtattaactttcaaacttgttcatcattctaaaaagattacgctcataggcgatgccaat
aagatacttcaatacaagaattacttccaagctaatggagcgagatccgatattgatttt
tacttgcagcctactttgaatcaaaagggtgtggtgatgatagcgagtaactataatgat
aatcctaacaacaaagaacaaccacagacctttgatgtgttgcaaggaagtcagccaatg
ctaggagctaacacaaaaaacttgcatggctatgatgtgagtggagcaaacaacaagcaa
gtgatcaatgaagtggcaagagaaaaagctcagctagaaaaaatcaatcagtattacaaa
acgctcttacaagacaaggaacaagaatataccactagaaaaaataaccaacgagaaatt
ttagaaacattgagtaatcgtgcaggttatcaaatgaggcagaatgtgattagttctgag
atttttaagaatggcaacttgaacatgcaaaccaaagaagaagaagttagggagaagcta
caagaagaaagagagaatgaatacttgcgcaatcaaatcagaagtttgctcagtggtaag
tga

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