Helicobacter pylori Shi417: HPSH417_02930
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Entry
HPSH417_02930 CDS
T02039
Name
(GenBank) cytoplasmic pump protein of the hefABC efflux system HefC
KO
K18138
multidrug efflux pump
Organism
hhr
Helicobacter pylori Shi417
Pathway
hhr01501
beta-Lactam resistance
hhr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hhr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPSH417_02930
01503 Cationic antimicrobial peptide (CAMP) resistance
HPSH417_02930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhr02000
]
HPSH417_02930
01504 Antimicrobial resistance genes [BR:
hhr01504
]
HPSH417_02930
Transporters [BR:
hhr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HPSH417_02930
Antimicrobial resistance genes [BR:
hhr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HPSH417_02930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
Motif
Other DBs
NCBI-ProteinID:
AFH97739
LinkDB
All DBs
Position
587846..590932
Genome browser
AA seq
1028 aa
AA seq
DB search
MYKTAINRPITTLMFALAIVFFGTMGFKKLSVALFPKIDMPTVVVTTTYPGASAEIIESK
VTDKIEEAVMGIDGIKKVTSTSSKNVSIVVIEFELEKPNEEALNDVVNKISSVRFDDSNI
KKPSINKFDTDSQAIISLFVSSSSVPATTLNDYAKNTIKPMLQKINGVGGVQLNGFRERQ
IRIYADPTLMNKYNLTYADLFSTLKAENVEIDGGRIVNSQRELSILINANSYSVADVEKI
QVGNHVRLGDIAKIEIGLEEDNTFASFKDKPGVILEIQKIAGANEIEIVDRVYEALKRIQ
AISPNYEIRPFLDTTGYIRTSIEDVKFDLVLGAILAVLVVFAFLRNGTITLVSAISIPIS
IMGTFALIQWMGFSLNMLTMVALTLAIGIIIDDAIVVIENIHKKLEMGMNKRRASYEGVR
EIGFALVAISAMLLSVFVPIGNMKGIIGRFFQSFGITVALAIALSYVVVVTIIPMVSSVV
VNPRHSRFYVWSEPFFKALESYYTRLLQWVLNHKLIIFIAVVLVFVGSLFVASKIGMEFM
LKEDRGRFLVWLKAKPGVSIDYMTQKSKIFQKAIEKHAEVEFTTLQVGYGTAQNPFKAKI
FVQLKPLKERKKERKLGQFELMSALRKELKSMPEAKGLESINLSEVSLIGGGGDSSPFQT
FVFSHSQEAVDKSVANLKKFLLESPELKGKVESYHTSTSESQPQLQLKILRQNANKYGVS
AQTIGSVVSSAFSGTSQASVFKQDGKEYDMIIRVPDNKRISVEDIKRLQVRNKYDKLMFL
DALVEITETKSPSSISRYNRQRSVTVLAEPNRNAGVSLGEILTQVSKNTKEWLVEGANYR
FTGEADNAKETNGEFLIALATAFVLIYMILAALYESILEPFIIMVTMPLSFSGAFFALGL
VHQSLSMFSMIGLILLIGMVGKNATLLIDVANEERKKGLNIQEAILFAGKTRLRPILMTT
IAMVCGMLPLALASGDGAAMKSPIGIAMSGGLMISMVLSLLIVPVFYRLLAPIDDKIKRF
YQNQKTLE
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaacagcgattaatcgtcctattacgaccttgatgttcgctttggcgattgtt
ttttttgggactatgggttttaaaaaattgagcgtggcgcttttccctaaaattgatatg
cctacggtggtggttactacgacttatcctggggctagcgctgaaatcatagagagtaag
gtaaccgataagattgaagaagcggtgatggggattgatgggatcaaaaaggttacttcc
acgagttctaaaaatgtgagtatcgtcgtcattgagtttgagttagaaaaacctaatgaa
gaagccttaaacgatgtggttaataaaatttcttcggtgcgttttgatgattccaacatt
aaaaaaccctctatcaataaatttgataccgacagccaagccattatttcgttgtttgtg
agcagttcaagcgtgcctgctacaacccttaatgactacgctaaaaacaccattaaaccc
atgctccaaaaaatcaatggggtagggggcgtgcaactcaacggctttagggagcgccag
attaggatttatgcagatcccactttgatgaataaatacaacctgacttatgcggatctt
ttcagcacgcttaaagcggagaatgtggaaattgatggggggcgcattgtcaatagccaa
agggaattgtctattttaattaatgcgaatagttacagcgttgcggatgtggaaaagatt
caagtgggtaatcatgtgcgtcttggcgatattgcaaagattgaaatcggtttggaagaa
gacaacacttttgcgagctttaaagacaaacccggtgtgattttggaaatccaaaagatt
gccggagcgaatgaaattgaaatcgtagatagggtgtatgaagctttaaaacgcattcaa
gccattagccctaactatgaaatcagaccctttttagacaccacgggctatatccgcacc
tctattgaagatgtgaaatttgacttggtcttaggggcgattttggcggttttagtggtg
tttgcattcttgcgtaatggcacgatcactttagtttcagcgatctctatccctatttct
atcatggggacttttgcgctcattcaatggatgggcttttcattaaacatgctcaccatg
gtggctttaacgctagcgatagggattatcattgatgatgcgatcgtggtgattgaaaac
atccataaaaagctagaaatgggcatgaacaaacggagagcaagctatgagggggtgagg
gaaattggctttgcgttagtggcgatttcagcgatgctgctctctgtttttgtgcctata
gggaacatgaaaggcattattgggcgctttttccaaagctttgggatcacggtggcttta
gcgatcgctctatcgtatgtggtggtcgttacgattatccccatggtaagctcagtcgtg
gtcaatcccaggcattctcgtttttatgtgtggagtgagcctttttttaaggctttagag
tcttattacaccagattgctccagtgggtgttaaaccacaagctcattatctttatagcg
gtggttttggtgtttgtgggttcgctttttgtggcttctaagatcggtatggagttcatg
ctgaaagaagatagggggaggtttttagtgtggcttaaggctaaaccgggcgtgagcata
gattacatgacacaaaagagtaagatctttcaaaaagcgattgaaaagcatgctgaggtg
gaatttaccaccttgcaagtgggttatggcaccgcacaaaacccttttaaggctaagatt
tttgtgcaactcaagcctttaaaagagcgtaaaaaagagcgcaaattggggcaatttgag
ttgatgagtgctttaaggaaggaattaaaaagcatgcctgaagctaaaggtttagagagt
attaatctttctgaagtctctcttatagggggcggtggggatagttcgcccttccaaacc
tttgtgttttcccattctcaagaagcggtggataaaagcgtagcgaatttgaaaaaattc
ttattagaaagccctgaattaaaaggcaaggttgaaagctaccatacaagcacgagcgaa
tcgcaaccgcaactgcaactgaaaatcttaagacaaaacgccaacaaatacggcgtgagc
gctcaaaccattggctcagtggtgagctctgctttctctgggacttctcaagcgagcgtg
ttcaagcaagatggtaaagaatacgacatgattattagagtgcctgataacaagcgcatt
tctgtagaagacatcaaacgcttgcaagtgcgtaataaatacgataaattgatgttttta
gacgctttagtggaaatcacagaaactaaaagcccgtccagtatttctcgctataaccgc
caacgcagcgttacggtgcttgctgagcctaataggaatgcgggcgtttctttgggcgag
attttaacgcaagtgagcaaaaacactaaagaatggctggttgaaggggcgaattacaga
ttcaccggagaagcggataacgctaaagagaccaatggggagtttttgatcgctctagcg
acagcgtttgtgttgatttacatgattttagcggcgttgtatgagtccattttagagcct
tttatcatcatggttaccatgcctttaagcttttcaggggcgttttttgctctgggttta
gtccatcagtctttgagcatgttctctatgataggcctaattttgctcattggtatggtg
ggtaaaaacgccacgcttttaattgatgtggcgaatgaagagcgtaaaaaaggtttgaat
atccaagaagccattttgtttgccggcaaaacccgtctgagaccgattttaatgacgacc
attgcgatggtttgcggcatgctacctttagcgttggcgagtggggatggagcagcgatg
aaatcccctatagggattgcgatgagtgggggcttgatgatttctatggtgttaagctta
ctcattgtgccggtgttttatcgccttctcgctcccatagacgacaaaatcaagcggttt
tatcaaaaccaaaaaactttagaatga
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