Candidatus Pantoea carbekii: HHS_01660
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Entry
HHS_01660 CDS
T02865
Symbol
ygcF
Name
(GenBank) YgcF protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs00790
Folate biosynthesis
hhs01100
Metabolic pathways
Module
hhs_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
HHS_01660 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhs03016
]
HHS_01660 (ygcF)
Enzymes [BR:
hhs01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
HHS_01660 (ygcF)
Transfer RNA biogenesis [BR:
hhs03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HHS_01660 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
BAO00136
UniProt:
U3U201
LinkDB
All DBs
Position
243107..243778
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AA seq
223 aa
AA seq
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MFYPINEIFQTLQGEGFYTGVPSLFIRLQGCPICCTWCDTKYTWKKLINRNNSLNAILLK
KVKNDTWSNADLVTLIDTIQKKGWTARHVVITGGEPAIYDLYPLTHALEGLGFHCQIETS
GTHKLKCSHNTWVTVSPKVNMHNGYPVLDQTLQRADEIKYPVLNAQDLEVLKKLLLRLGD
SKKRIIALQPISLDETATKLCIKTCIDRNWLFSIQMHKYINIS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcctattaacgaaatattccagactttacaaggagagggtttttacactggt
gttccgtcattatttattcgtttacaaggatgtccaatatgttgtacctggtgtgataca
aaatatacttggaaaaaattgattaatcgaaataattcattaaatgctattttattaaaa
aaagttaaaaacgatacttggagtaatgctgatttagttacattgattgatacaattcag
aagaaaggttggacggcacgtcatgtagttattacaggtggtgaaccagctatctacgat
ttatatcctttaactcatgctttagaaggattaggctttcattgtcagattgaaactagt
ggaacacataaattaaaatgttcacataatacatgggtaacagtttcgcctaaagtaaat
atgcataacgggtatccagtattagatcaaaccttacagcgtgcagatgaaatcaaatat
ccagtattaaatgctcaagatcttgaagtattaaaaaagttattattaagattaggagat
agtaagaaacgtattatagcattacagccgatcagtctggatgaaacagcaactaaacta
tgtattaaaacttgcattgatcgtaactggctgttttcaattcaaatgcataagtatatt
aatatcagttaa
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