Hyaena hyaena (striped hyena): 120242844
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Entry
120242844 CDS
T07257
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03018
RNA degradation
hhv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120242844
09123 Folding, sorting and degradation
03018 RNA degradation
120242844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhv03019
]
120242844
03041 Spliceosome [BR:
hhv03041
]
120242844
Messenger RNA biogenesis [BR:
hhv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120242844
mRNA degradation factors
5'-3' decay
Lsm complex
120242844
Spliceosome [BR:
hhv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120242844
Complex C
U2 snRNP components
120242844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Motif
Other DBs
NCBI-GeneID:
120242844
NCBI-ProteinID:
XP_039104738
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDKETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggaccagcaacaaactaccaacacagtagaggagcccctggatctc
atcaggctcagcctggatgagcgaatttatgtgaaaatgagaaatgacagagagcttcga
ggcagattacatgcttatgatcagcatttaaatatgatcttgggagatgtggaagagact
gtgactaccatagaaattgataaggaaacatacgaagagatatataaatcaacaaaacgg
aatattccgatgctctttgtccggggagatggtgtcgtactagttgcccctccattaaga
gttggctga
DBGET
integrated database retrieval system
