Haemophilus influenzae PittGG (nontypeable): CGSHiGG_09150
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Entry
CGSHiGG_09150 CDS
T00544
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
hiq
Haemophilus influenzae PittGG (nontypeable)
Pathway
hiq03030
DNA replication
hiq03410
Base excision repair
hiq03420
Nucleotide excision repair
hiq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hiq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGSHiGG_09150 (ligA)
03410 Base excision repair
CGSHiGG_09150 (ligA)
03420 Nucleotide excision repair
CGSHiGG_09150 (ligA)
03430 Mismatch repair
CGSHiGG_09150 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hiq03032
]
CGSHiGG_09150 (ligA)
03400 DNA repair and recombination proteins [BR:
hiq03400
]
CGSHiGG_09150 (ligA)
Enzymes [BR:
hiq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CGSHiGG_09150 (ligA)
DNA replication proteins [BR:
hiq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CGSHiGG_09150 (ligA)
DNA repair and recombination proteins [BR:
hiq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CGSHiGG_09150 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGSHiGG_09150 (ligA)
MMR (mismatch excision repair)
DNA ligase
CGSHiGG_09150 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CGSHiGG_09150 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
HHH
PTCB-BRCT
BRCT_2
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
ABR00632
UniProt:
A5UIM6
LinkDB
All DBs
Position
complement(1690789..1692801)
Genome browser
AA seq
670 aa
AA seq
DB search
MTNIQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQ
RVGAKPLSGFSQIRHEIPMLSLDNAFSDTEFNAFVKRIEDRLILLPKPLTFCCEPKLDGL
AVSILYVNGVLTQAATRGDGSTGEDITANIRTIRNVPLQLLTDNPPARLEVRGEVFMPHA
GFERLNKYALEHNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGVDLPTTH
YDRLQWLKSIGIPVNPEIRLCNGADEVLGFYRDIQNKRSSLGYDIDGTVLKINDIALQNE
LGFISKAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVAGVTVSNATLH
NGDEIERLNIAIGDTVVIRRAGDVIPQIIGVLHERRPDNAKPIIFPTNCPVCDSQIIRIE
GEAVARCTGGLFCAAQRKEALKHFVSRKAMDIDGVGGKLIEQLVDRELIHTPADLFKLDL
TTLTRLERMGAKSAENALNSLENAKSTTLARFIFALGIREVGEATALNLANHFKTLDALK
DANLEELQQVPDVGEVVANRIFIFWREAHNVAVVEDLIAQGVHWETVEVKEASENLFKDK
TVVLTGTLTQMGRNEAKALLQQLGAKVSGSVSSKTDFVIAGDAAGSKLAKAQELNITVLT
EEEFLAQITR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatattcaaactcaactagacaatctacgcaaaaccttgcgccaatatgaatac
gaataccacgttttagataatccgagcgtgcctgatagcgaatacgatcgtttatttcat
cagctcaaagccctagaattagagcatcctgaatttctgacgtcagattcgccaactcaa
cgtgttggtgcaaaaccactttctgggtttagccaaattcgtcacgaaattcctatgctc
tctttggataatgctttttccgatacagaatttaatgcttttgtaaaacgcattgaagat
cgtttaatcctattaccgaaaccacttactttctgttgcgaacctaaacttgatggcttg
gctgtgagtattttgtatgttaatggtgtacttacacaagctgccactcgtggtgatggc
agcacaggcgaagatattacagccaatatccgcacgattcgtaatgttccattacaactt
ttaacagataatcctccagcacgtttagaagtgcggggcgaagtttttatgccgcacgca
ggctttgagcgtttaaataaatatgcgttagaacataatgaaaaaacctttgctaatcct
cgcaatgcagcggcaggctctttacgccagcttgatcctaatattaccagcaaacgtccg
ctggtattaaatgcttatggtattggaattgctgagggggttgatctgccgactacgcat
tatgatcgtttgcaatggctaaaatctatcgggattccagtaaatcctgaaattcgttta
tgcaatggtgcagatgaagttttaggtttttatcgagatattcaaaacaaacgtagctcg
ttaggttatgatattgacggaacggtattaaaaatcaatgatatagccttacaaaatgaa
ctaggatttatttctaaagcacctcgctgggcgattgcttataaattccccgcccaagaa
gaattaaccctgttgaatgatgttgaattccaagtgggtcgaactggcgcaatcacacca
gttgccaaattagagccagtgtttgttgcaggcgttacagtaagtaatgccaccttacat
aatggcgatgaaattgaacgtttaaatatcgctattggcgatactgttgttattcgtcga
gcaggcgatgtaattccacaaattattggcgtattacacgaacgtcgccctgataatgct
aaaccaatcattttcccaacaaattgccctgtgtgcgattctcaaattattcgtattgaa
ggcgaagcagtagcacgttgcacgggaggattattctgtgcggcacagcgtaaagaggcg
ttaaaacatttcgtctctcgtaaagcaatggatattgatggtgtaggcggaaaattaata
gagcaattagtcgatcgagaactgattcatacacctgcggacttatttaaacttgattta
accacgctcacacgcttagaaagaatgggtgcaaaatctgcagaaaacgcactcaatagt
cttgaaaatgcaaaaagcacgacgcttgctcgctttatttttgctttaggcattcgtgaa
gtgggcgaagccactgcattaaatcttgctaatcatttcaaaactttagatgcgcttaaa
gacgcaaatcttgaagaacttcaacaagtgcctgatgtaggggaagttgtagcgaaccga
atttttatattttggcgtgaagcgcataatgttgcagtcgtggaggatttaatcgcacaa
ggtgtgcattgggaaactgtagaagtgaaagaagcaagtgaaaacttgttcaaagataaa
actgtagtactgacaggcactcttacacaaatggggcgtaatgaagcaaaagccttatta
caacagcttggtgcaaaagtaagtggttcggtatccagtaaaacagatttcgttatcgca
ggcgatgcggcaggctctaaacttgcaaaagctcaagaactaaatattacagtattaaca
gaagaagaatttttagcacagataacaagataa
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