Heterobasidion irregulare: HETIRDRAFT_381949
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Entry
HETIRDRAFT_381949 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K15083
DNA repair protein RAD16
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_381949
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
HETIRDRAFT_381949
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
zf-C3HC4_3
PTR3_N
DEAD_2
Motif
Other DBs
NCBI-GeneID:
20672099
NCBI-ProteinID:
XP_009544102
JGI:
Hetan2_381949
UniProt:
W4KF08
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MAPRTRRRPRSASPAASATATPTTVVSTTFNSTKTSTDATPASSNLGEDEKDYSLPQPRA
TGRPVRVAAARGTRKRAMESEHEDEPPNAQPSKRRAVARSAYVEVPSKPNKTQQPTVKSI
PKARGKGKAKAPTPSIDGEIVPETEAELEYDENASVNKSDDSGSEFEDDEDFSIEDMEDD
DDDDDYGSKRPRKSLKSFTRALDYESDGIEEVMMDAAIQESLQSAGLAISVRNGALTLGA
GSSGAGMRLLAAASTEDGDFIEVSSDEDVEPSALSSEDEAPPTKGKGKGKGKGKGKSKAQ
AKGKKVTSAEEKKLKKKALEERTRLKQAERELSQKLGRRLTYAEKSTVALHMYHPELRNA
WGDLKTKMKVVQPKKAEQPSNLKVTLLPFQQESLYWMRKQEFGSYAGGMLADEMGMGKTI
QIIALLVGDSVKPSLVIAPTVAIMQWRNEIAAHTDGMKVLVWHGSGRESDTKQLIKYDVV
LTTYAVLESCFRKQHSGFKRKGQIIKEISPLHAIEWNRVILDEAHNIKERATNTAKAAFE
LKAKYRWCLSGTPLQNRVGELYSLVRFLGGDPFSYYFCKRCDCKSLHWKFSDKRHCDDCG
HSPMQHTCFWNNEILTPIQKHGMVGPGKEAFAKLRILLDRIMLRRTKVQRADDLGLPPRL
VIVRRDFFSPEEKELYLSLFSDAKRQFSTYLDAGTLLNNYSNIFSLLTRMRQMACHPDLV
IRSKNNAGTFVSEEDVGEAAVCRICNDVAEDAIQAKCRHIFDRECVKQYLNTAMEVTPAC
PVCHLPLTIDLEAPALELAQSAAPRQGILGRLNIDTWRSSSKIEALVEELSNLRRQDATT
KSIVFSQFVNFLDLIAFRLQRAGFVVCRLEGTMSPQARDATIQYFMNNVHVTVFLVSLKA
GGVALNLTEASRVYLMDSWWNPAVEYQAMDRIHRLGQHRPVQAIKLVIEDSIESRIVQLQ
EKKSAMVDATLSTDDSAMGRLTPEDLSFLFSYDILCADD
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggccccacgtacaagacggcgtccacgctcagcctctcccgccgcctccgcgacggcg
acaccgacgactgtcgtatcgacaaccttcaacagcaccaagacttccactgacgctacc
cctgcgagcagcaaccttggtgaagacgagaaagactactcgctgcctcagccaagagca
acgggaaggcccgtcagagtcgctgctgccagaggcaccagaaaacgggccatggagagt
gaacatgaggatgagccacccaacgcgcagccttcgaagaggcgcgctgtcgcccggtcc
gcctatgtcgaagtgccgtcgaagccgaacaagacccaacaaccgacagtaaaatccatt
ccaaaggcaaggggtaaaggaaaggcgaaggcccccactccttctattgacggtgaaatc
gttccagagacggaggctgaactcgaatacgatgaaaacgcctcggtcaacaaatcggac
gacagtggttccgagtttgaagatgacgaagatttctctatagaagacatggaagacgac
gatgacgacgatgactacggctcgaaaagaccacgcaagtcgctcaagtcattcacgcgg
gctcttgactatgaatcggacggcatcgaagaagttatgatggacgccgctattcaggag
tccctgcagagcgcaggcctcgcgattagtgtgcgcaatggcgccttgactttgggcgct
ggctcgtcgggcgctggcatgcgccttctcgccgccgcctcaaccgaggacggggatttc
atagaggtgtcttccgacgaggacgttgaaccgtccgcattgagctccgaagacgaggcc
ccgcctacgaagggcaaaggaaagggcaaaggcaaaggcaaaggcaagagcaaagcacag
gcaaaggggaagaaagtcacctccgccgaagagaagaagctcaaaaagaaagccctcgaa
gagcgaacgcgcctgaaacaggcagagcgggagttgtcccaaaaacttggtcgcaggttg
acttatgctgaaaagtcgacggttgcgctgcacatgtaccaccctgagttgcgcaatgct
tggggtgacttgaaaacgaagatgaaggtcgttcagcctaagaaggccgaacagccgtct
aacctcaaggtaactctcttgccatttcagcaagagtcgctctattggatgcgtaaacaa
gaattcggatcatatgcggggggcatgttggcagatgagatgggaatgggtaaaacaatc
cagatcatagctctactcgtcggcgactctgtaaagccaagccttgtcatcgcaccaacg
gttgcgattatgcaatggaggaacgaaattgctgcgcacacagacggcatgaaggtgctc
gtgtggcacggctcagggcgtgaatcggacacgaagcagcttataaagtacgacgtcgta
cttacgacatacgctgttctcgaaagctgcttccgcaagcagcattccggcttcaagcga
aaggggcagatcatcaaggaaatttctccgcttcatgcgattgaatggaaccgtgtgatc
ctggatgaggcacacaacatcaaagagcgcgcaaccaacacggccaaggctgcgttcgag
ctgaaggcaaagtataggtggtgtctttcaggaacaccgctgcagaaccgtgtcggcgaa
ctttacagcttggtcaggtttctgggaggggaccccttctcttactacttctgtaagaga
tgtgactgcaaatcgttacattggaagttctcagataagagacattgcgatgactgtggt
catagtcccatgcaacacacgtgtttctggaacaacgaaatcttgacgcccattcagaaa
cacggcatggtcggtccaggcaaagaagcattcgcgaagttgcggatcctccttgaccgg
atcatgcttcgtcgcaccaaggtccaacgcgcggacgatttgggcttgccgcctcgtctg
gtcattgtgcgacgcgacttctttagtcccgaggagaaggagctgtatctcagcctgttt
tcggatgccaagcggcagttcagcacctacctcgatgcgggaactctcctgaacaattac
tcgaacatcttcagtttgctgacgcgcatgcgacagatggcttgtcatccggatcttgtc
atccggagcaagaacaacgcgggcacgttcgtgtcggaggaagacgtcggcgaggcagcc
gtatgtcgtatttgtaacgacgtcgcggaggacgcgatccaagcgaagtgcagacacatc
tttgaccgcgagtgcgtgaagcagtacttgaacaccgccatggaagtcacgcctgcatgt
ccggtgtgtcatctcccgctgacgatcgacctcgaggccccggccctcgagctcgcgcag
tccgcagccccgaggcagggcatcctcgggcgcctcaacatcgacacctggcgctcgtcg
tccaagatcgaggcgctcgtggaggaattgagtaatttgcggaggcaggatgccacgacg
aagagcatcgtgttcagccaatttgtcaactttttggatctgatcgcgttccggctgcag
cgggctgggtttgtggtgtgtcgcctcgaggggactatgagcccccaggcgagggacgcg
acgatccaatattttatgaacaacgtgcatgtcaccgtgttcctcgtcagcttgaaagca
gggggcgtcgcgctcaacttgacagaagcgtcgcgcgtgtacctcatggacagctggtgg
aatcctgcggtcgaataccaggctatggatcgcattcatcggctcgggcaacaccgacct
gtgcaagctatcaagctggtgatcgaagatagcatcgagagtcgcatcgttcagctacag
gagaagaaatcggccatggtggatgcgacgctctcaacggacgactcggcgatggggcgg
ctgacccccgaagatctttcattcttattcagctatgatatcttatgcgcggacgattaa
DBGET
integrated database retrieval system
