Heterobasidion irregulare: HETIRDRAFT_410812
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Entry
HETIRDRAFT_410812 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
hir
Heterobasidion irregulare
Pathway
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_410812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_410812
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_410812
03032 DNA replication proteins [BR:
hir03032
]
HETIRDRAFT_410812
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
HETIRDRAFT_410812
Spliceosome [BR:
hir03041
]
Complex A
U1 snRNP components
Sm proteins
HETIRDRAFT_410812
U2 snRNP components
HETIRDRAFT_410812
Complex B
U1 snRNP components
HETIRDRAFT_410812
U4/U6.U5 tri-snRNP components
HETIRDRAFT_410812
Complex C
U2 snRNP components
HETIRDRAFT_410812
DNA replication proteins [BR:
hir03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
HETIRDRAFT_410812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
20672901
NCBI-ProteinID:
XP_009549232
JGI:
Hetan2_410812
UniProt:
W4JZE3
LinkDB
All DBs
Position
Unknown
AA seq
176 aa
AA seq
DB search
MPPPKSKGGKMLSLINWRLKVTITDGRALTGQMLAFDRHMNLVLAECEEFRRIRPKKKPG
ETEAGPEQEVKRTLGLVILRGEAVVSLTVEGPPPVQDEDKKNALPVGPGRGMPAGRGMGM
MPPMGPPSLQRPPMPFAPPGMPGAPPGFRPPGFPQNLPFPPPGFGGPPPGFQQPPQ
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccccaaaatcaaaaggcggtaaaatgttgagcctcatcaactggaggctcaaa
gtcaccatcaccgatggacgtgcgcttacaggccagatgcttgcgtttgaccgacacatg
aaccttgtcttggccgaatgcgaagaattccggcgcatcaggccgaagaagaagcctggt
gaaacggaggcaggcccggagcaagaggtgaagcgtacgctcggactcgtgattttgcgt
ggcgaagctgtggtcagtttgaccgtagagggccctcctcctgttcaggacgaggacaag
aagaatgcgctccccgttggacctggtcgtggtatgccagcaggtcgtggaatgggcatg
atgccccctatgggacccccttctctccaacgccccccaatgccgtttgcacccccagga
atgcccggagctcctcccggcttcaggccccctggtttccctcagaatctgcctttccct
ccacctggatttggtgggccccctcctggcttccaacagcctccacaatag
DBGET
integrated database retrieval system