KEGG   Heterobasidion irregulare: HETIRDRAFT_441743
Entry
HETIRDRAFT_441743 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
hir  Heterobasidion irregulare
Pathway
hir03420  Nucleotide excision repair
hir04111  Cell cycle - yeast
hir04120  Ubiquitin mediated proteolysis
hir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    HETIRDRAFT_441743
   04120 Ubiquitin mediated proteolysis
    HETIRDRAFT_441743
  09124 Replication and repair
   03420 Nucleotide excision repair
    HETIRDRAFT_441743
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    HETIRDRAFT_441743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hir04121]
    HETIRDRAFT_441743
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_441743
Enzymes [BR:hir01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     HETIRDRAFT_441743
Ubiquitin system [BR:hir04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   HETIRDRAFT_441743
  Multi subunit type E3
   SCF complex
    Ring finger protein
     HETIRDRAFT_441743
   Cul2 complex
     HETIRDRAFT_441743
   Cul3 complex
     HETIRDRAFT_441743
   Cul4 complex
     HETIRDRAFT_441743
   Cul7 complex
     HETIRDRAFT_441743
   Cul8 complex
     HETIRDRAFT_441743
   Cul9 complex
     HETIRDRAFT_441743
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      HETIRDRAFT_441743
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      HETIRDRAFT_441743
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 20675390
NCBI-ProteinID: XP_009550812
JGI: Hetan2_441743
UniProt: W4JUT8
LinkDB
Position
Unknown
AA seq 108 aa
MADMDVDPPAGSVVKKDNKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIDCQANQ
VSATSEECNAAWGICNHAFHFHCISRWLKTRNVCPLDNREWELQKYGR
NT seq 327 nt   +upstreamnt  +downstreamnt
atggctgatatggacgtagacccccctgctggctccgtggtaaagaaagacaacaagaaa
aggttcgaggtcaagaagtggaacgctgtcgctctatgggcctgggatatcgtcgtagac
aactgcgcgatctgcaggaatcatatcatggatctttgcatcgattgtcaggctaaccaa
gtctctgcgacgagcgaagaatgtaacgcagcctggggtatctgtaaccacgctttccac
ttccactgtatctcccgctggcttaagacaaggaacgtatgtcctctggacaatcgtgag
tgggaattgcagaaatacggtcgttaa

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