Haemophilus influenzae 723: NTHI723_00539
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Entry
NTHI723_00539 CDS
T03722
Symbol
ligA_2
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
hix
Haemophilus influenzae 723
Pathway
hix03030
DNA replication
hix03410
Base excision repair
hix03420
Nucleotide excision repair
hix03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NTHI723_00539 (ligA_2)
03410 Base excision repair
NTHI723_00539 (ligA_2)
03420 Nucleotide excision repair
NTHI723_00539 (ligA_2)
03430 Mismatch repair
NTHI723_00539 (ligA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hix03032
]
NTHI723_00539 (ligA_2)
03400 DNA repair and recombination proteins [BR:
hix03400
]
NTHI723_00539 (ligA_2)
Enzymes [BR:
hix01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NTHI723_00539 (ligA_2)
DNA replication proteins [BR:
hix03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NTHI723_00539 (ligA_2)
DNA repair and recombination proteins [BR:
hix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NTHI723_00539 (ligA_2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NTHI723_00539 (ligA_2)
MMR (mismatch excision repair)
DNA ligase
NTHI723_00539 (ligA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NTHI723_00539 (ligA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH
Nlig-Ia
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AJO91002
UniProt:
A0A0Y7IU71
LinkDB
All DBs
Position
551499..553511
Genome browser
AA seq
670 aa
AA seq
DB search
MTNIQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQ
RVGAKPLSGFSQIRHEIPMLSLDNAFSDAEFNAFVKRIEDRLILLPKPLTFCCEPKLDGL
AVSILYVNGELTQAATRGDGTTGEDITANIRTIRNVPLQLLTDNPPARLEVRGEVFMPHA
GFERLNKYALEHNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGIDLPTTH
YDRLQWLKSIGIPVNPEIRLCNGADEVLGFYRDIQNKRSSLGYDIDGTVLKINDIALQNE
LGFISKAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVAGVTVSNATLH
NGDEIERLNIAIGDTVVIRRAGDVIPQIIGVLHERRPDNAKPIIFPTNCPVCDSQIIRIE
GEAVARCTGGLFCAAQRKEALKHFVSRKAMDIDGVGGKLIEQLVDRELIHTPADLFKLDL
TTLTRLERMGAKSAENALNSLENAKSTTLDRFIFALGIREVGEATALNLANHFKTLDALK
DANLEELQQVPDVGEVVANRIFIFWREAHNVAVVEDLIAQGVHWETVEVKEASENLFKDK
TVVLTGTLTQMGRNEAKALLQQLGAKVSGSVSSKTDFVIAGDGAGSKLAKAQELNITVLT
EEEFLAQITR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatattcaaactcaactagacaatctacgcaaaaccttgcgccaatatgaatac
gaataccacgttttagataatccgagcgtgcctgatagcgaatacgatcgtttatttcat
cagctcaaagccctagaattagagcatcctgaatttctgacgtcagattcgcccactcaa
cgtgttggtgcaaaaccactttctgggtttagccaaattcgtcacgaaattcctatgctc
tctttggataatgctttttccgatgcagaatttaatgcttttgtaaaacgcattgaagat
cgtttaatcctattaccgaaaccacttactttctgttgcgaacctaaacttgatggcttg
gctgtgagtattttgtatgttaatggtgaacttacacaagccgccactcgtggtgatggc
accacaggcgaagatattacagccaatatccgcacgattcgtaatgttccattacaactt
ttaacagataatcctccagcacgtttagaagtgcggggcgaagtttttatgccgcacgca
ggctttgagcgtttaaataaatatgcgttagaacataatgaaaaaacctttgctaatcct
cgcaatgcagcggcaggctctttacgccagcttgatcctaatattaccagcaaacgtccg
ctggtattaaatgcttatggtattggaattgctgaggggattgatctgccgactacgcat
tatgatcgtttgcaatggctaaaatctatcgggattccagtaaatcctgaaattcgttta
tgcaatggtgcagatgaagttttaggtttttatcgagatattcaaaacaaacgtagctcg
ttaggttatgatattgacggaacggtattaaaaatcaatgatatagccttacaaaatgaa
ctaggatttatttctaaagcacctcgctgggcgattgcttataaattccccgcccaagaa
gaattaaccctgttgaatgatgttgaattccaagtgggtcgaactggcgcaatcacacca
gttgccaaattagagccagtgtttgttgcaggcgttacagtaagtaatgccaccttacat
aatggcgatgaaattgaacgtttaaatatcgctattggcgatactgttgttattcgtcga
gcaggcgatgtaattccacaaattattggcgtattacacgaacgtcgccctgataatgct
aaaccaatcattttcccaacaaattgccctgtgtgcgattctcaaattattcgtattgaa
ggcgaagcagtagcacgttgcacgggaggattattctgtgcggcacagcgtaaagaggcg
ttaaaacatttcgtctctcgtaaagcaatggatattgatggtgtaggcggaaaattaata
gagcaattagtcgatcgagagctaattcatacacctgcggacttatttaaacttgattta
accacgctcacacgcttagaaagaatgggtgcaaaatctgcagaaaacgcactcaatagt
cttgaaaatgcaaaaagcacgacgcttgatcgctttatttttgctttaggcattcgtgaa
gtgggcgaagccactgcattaaatcttgctaatcatttcaaaactttagatgcgcttaaa
gacgcaaatcttgaagaacttcaacaagtgcctgatgtaggggaagttgtagcgaaccga
atttttatattttggcgtgaagcgcataatgttgcagtcgtggaggatttaatcgcacaa
ggtgtgcattgggaaactgtagaagtgaaagaagcgagtgaaaacttgttcaaagataaa
actgtagtactgacaggcactcttacacaaatggggcgtaatgaagcaaaagccttatta
caacagcttggtgcaaaagtaagtggttcggtatccagtaaaacagatttcgttatcgca
ggtgatggggcaggctctaaacttgcaaaagctcaagaactaaatattacagtattaaca
gaagaagaatttttagcacagataacaagataa
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integrated database retrieval system
