Natrinema thermotolerans: DVR14_10275
Help
Entry
DVR14_10275 CDS
T05948
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
hjt
Natrinema thermotolerans
Pathway
hjt03030
DNA replication
hjt03410
Base excision repair
hjt03420
Nucleotide excision repair
hjt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hjt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DVR14_10275
03410 Base excision repair
DVR14_10275
03420 Nucleotide excision repair
DVR14_10275
03430 Mismatch repair
DVR14_10275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hjt03032
]
DVR14_10275
03400 DNA repair and recombination proteins [BR:
hjt03400
]
DVR14_10275
Enzymes [BR:
hjt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DVR14_10275
DNA replication proteins [BR:
hjt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DVR14_10275
DNA repair and recombination proteins [BR:
hjt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DVR14_10275
NER (nucleotide excision repair)
GGR (global genome repair) factors
DVR14_10275
MMR (mismatch excision repair)
DNA ligase
DVR14_10275
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DVR14_10275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
RNA_ligase
5_3_exonuc
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QCC58998
LinkDB
All DBs
Position
complement(1717858..1719936)
Genome browser
AA seq
692 aa
AA seq
DB search
MPAADEDEANPYLREPPTDFEPVEDLSEDEAREQVTLLREAVREHDRRYYVENDPIIGDR
TYDDLFSRLRDLEEAFGLDHPDSPTRRVGGEPIEAFDTVEHVAPMLSIEGSGEEGDIREF
DERVRREVGDVDYVCEPKFDGVSMEVVYEDGRLERAVTRGDGREGDDVTENARTIGSVPQ
RLRGDHPEFLAVRGEVYMPKDAFQAYNRERIERGEDPFANPRNATAGTIRQLDPTVVAER
PLAVFYFDVLEASDLADSHRDELERFPDYGLRTNDRVEVVGDIEDAIDYRDRMLEAREEL
DYEIDGVVIKVDDRAAREELGRTARHDRWAFAYKFPARAEVTTIADVAVQVGRTGRLTPV
ALLEPVDVGGVTVSRASLHNPEEIAEKNVNIGDTVRVQRAGDVIPYVEEVLEKGSEGHYE
LPDRCPVCDSPVERDGPMAFCTGGLGCDAQLRRSIEYYAGDDGLDLEGLGEKSVRQLVDA
GLLESVADLYALDQADLTDLEGWGEQSAENLLAEIAASREPPLSDFVSALGIPLVGPATA
RELAREFGTFAALREAAESEPERLEGVDDVGETVAETVHDFFTSEANAAVVDTVLDHVSP
QEVDVETGGDELAGLTFVFTGSLEGVTRDEAQATVEAHGANATGSVSGNTDYLVAGENPG
ATKQGDARDNDVPILEEGEFRDLLAERGIDLE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgccgacgaggacgaggcgaacccctatctccgagagccgccaaccgacttc
gagccggtcgaggatctctccgaggacgaggcccgcgagcaggtcacactgctccgggag
gccgtccgcgaacacgaccgccgctactacgtcgagaacgacccgatcatcggcgaccgg
acctacgacgacctcttttcccggctgcgcgacctcgaggaggcgttcggtctcgaccac
cccgacagccccacccgcagggtcgggggcgaaccgatcgaagcgttcgacaccgtcgaa
cacgtcgcgccgatgctctcgatcgagggcagcggcgaggagggagacatacgcgagttc
gacgagcgggtgcgacgagaggtcggcgacgtcgactacgtctgcgagcccaagttcgac
ggcgtctccatggaggtcgtctacgaggacggccgcctcgagcgcgccgtgacccgcggg
gacggccgcgagggcgacgacgtgaccgaaaacgcgcgcacgatcggctccgtgccgcag
cggctccgcggcgatcaccccgagttcctcgcggtccggggcgaagtctacatgcccaag
gacgccttccaggcgtacaaccgcgaacgcatcgagcgcggcgaggaccccttcgccaac
ccgcggaacgcgaccgctggcacgatccgccagctcgatccgaccgtcgtcgccgagcgc
ccgctcgcggtcttttacttcgacgtcctcgaggccagcgacctcgcggacagccatcgg
gacgaactcgagcggttccccgactacgggctgcggaccaacgaccgcgtcgaggtcgtc
ggagacatcgaggacgcgatcgactaccgcgaccgcatgctcgaggctcgcgaggagttg
gactacgagatcgacggcgtcgtcatcaaggtcgacgaccgcgcggcccgcgaggaactg
gggcgaacggcccgtcacgaccgctgggccttcgcctacaagttccccgcccgcgcggaa
gtgacgacgatcgccgacgtggcggtccaggtcggccgaacgggccggctgactcccgtc
gccctgctcgagccggtcgacgtcggcggcgtcaccgtctcgcgggcgagcctgcacaac
cccgaggagatcgccgagaaaaacgtcaatatcggtgacacggttcgcgtccagcgggcc
ggcgacgtgatcccctacgtcgaggaggtcctcgagaagggcagcgagggccactacgaa
ctgcccgatcgctgtcccgtctgtgacagccccgtcgagcgcgacggccccatggccttc
tgtaccggtggattgggctgtgacgcccagcttcgtcggtcgatcgagtactacgcgggc
gacgacggcctcgacctcgagggactcggcgaaaagagcgtccgccaactggtcgacgcg
ggcctgctcgagtcggtcgcggacctctacgcactcgaccaggcggacctcaccgacctc
gagggctggggcgagcaaagcgccgagaacttgctcgccgagatcgcggccagccgcgag
ccgccgctttccgacttcgtctccgcgctcgggattcccctcgtcggtccggcgacggcc
cgcgaactcgcccgcgagttcggtaccttcgcggccctccgcgaggccgcggaaagcgag
cccgaacggctcgagggcgtcgacgacgtgggcgagaccgtcgccgagacggtccacgac
ttcttcacgagcgaggccaacgcggccgtggtcgacaccgtcctcgatcacgtctcaccg
caggaagtcgacgtcgagaccggcggggacgaactcgcggggctcaccttcgtcttcacc
ggctcgctcgagggcgtgactagggacgaagcccaagcaacggtcgaggcccacggggcc
aacgcgacgggcagcgtctcggggaacacggactacctcgtcgccggcgagaatccgggt
gcgacgaagcagggcgatgcgcgcgacaacgacgtcccgatcctcgaggagggcgagttc
cgggacctgctcgcggagagggggatcgacctcgagtga
DBGET
integrated database retrieval system