Halosquirtibacter laminarini: K4L44_09510
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Entry
K4L44_09510 CDS
T10546
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hlam Halosquirtibacter laminarini
Pathway
hlam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hlam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K4L44_09510 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlam03400
]
K4L44_09510 (nth)
Enzymes [BR:
hlam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K4L44_09510 (nth)
DNA repair and recombination proteins [BR:
hlam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K4L44_09510 (nth)
Prokaryotic type
K4L44_09510 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Ogg-HhH
HHH_8
DUF7128
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QZE12825
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All DBs
Position
2430844..2431494
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AA seq
216 aa
AA seq
DB search
MDKKERFQKVIEWFQTNMPIAETELDYRTPFELLVAVILSAQCTDKRVNMVTPALFERFP
TVEKMAEAEVPEIFEYIRSISFPNNKAKYLVGMAQMLQNEYESQVPNTVTELVKLPGVGR
KTANVIVSVIFDKPAMAVDTHVFRVSERIGLSYRSKTPLETEKQLIKYIPEELLPIAHHW
LILHGRYTCVARKPKCEHCGLQLWCKKYAREHKKEC
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaagagagattccagaaggtaatagagtggtttcaaacaaatatgcccatt
gcagagacagagttagactacagaacgccattcgaacttttggtagcagtgattttatcg
gcacaatgcaccgacaagagagtgaatatggtaacgcctgctctttttgaacgttttcca
acagtggagaagatggcagaggcagaggttcctgagattttcgaatatatccgttccatc
tctttccccaataacaaagccaaatatctagtgggcatggcacagatgctacaaaacgaa
tatgaatcacaagttccgaataccgtgacagaattggttaaactaccaggagtgggacgt
aaaacagccaatgtgatcgtttctgtgatcttcgataaaccagccatggctgtagacacc
catgtctttagagtatcagagcgcattggactatcttatcgatcgaaaacgccactagaa
acagagaagcagttaattaaatatatccccgaagaactactacctatagcacaccattgg
ctgatacttcatggtcgatatacatgcgttgcaagaaagccgaaatgcgaacattgtggg
cttcaattatggtgtaaaaaatatgctcgagaacataaaaaagaatgttaa
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