Haliaeetus leucocephalus (bald eagle): 104827946
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Entry
104827946 CDS
T08630
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104827946 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hle03041
]
104827946 (EFTUD2)
Spliceosome [BR:
hle03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104827946 (EFTUD2)
Complex C
U5 SnRNP specific factors
104827946 (EFTUD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
104827946
NCBI-ProteinID:
XP_010559618
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgacgagtttgggaactacatcgggccggagctggactcggac
gatgacgacgatgagttgggcagagagtctaaagatctggacgagcttgaggatgatgac
gatgatgatgatatgggggaccacgacgaggaccaccctggcatggaggtggtgctgcat
gaggataagaaatactatcccactgctgaggaagtctatgggcctgaagtagagacgata
gtacaagaggaagacacacagcctctcactgagcctattattaaacctgtgaaaaccaaa
aaattctctctgatggaacagacattaccggtcactgtctatgagatggatttcctggca
gatctgatggacaactcggagctaattcgaaatgtgactctgtgtgggcaccttcatcac
ggcaagacttgttttgttgactgcctgatagaacagacacacccagaaatccggaagcgc
tatgaccaggacctttgctacactgatatattgttcacagagcaagagaggggagtaggg
attaagagcacaccagtgactattgttctgccagacaccaaaggaaagtcttttctcttc
aacatcatcgacactccaggtcatgtcaatttttctgatgaggtgacagctggccttcgt
atttcggacggcgttgtgctattcattgatgcggctgagggggtgatgctgaacacagag
aggctgatcaagcacgcggtgcaggaaaggctagcagtgaccgtgtgcatcaacaagata
gaccgactgatcctggagctgaaattgccccctacagatgcttattacaaactcagacat
atcgtagacgaagttaatggtctgatcagcatgtattccaccgatgagaacctcgttctg
tctccccttctggggaacgtgtgtttctccagttcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggagacatcaattatcaggagtttgca
aagcggctttggggtgacatctacttcaacccgaagacccgcaagttcactaaaaaggcc
ccaacaagcagttcccagcgcagttttgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggacgtggacacgaccctgcccaggactctggatgaacttggc
atccacctaaccaaagaggaattgaaattgaacattcggccactcctgcggcttgtctgc
aagaagttctttggggaattcacaggctttgtggacatgtgtgtgcagcatatcccctcc
ccgaaggtgggagccaagacaaaaatcgagcatacctacactggtggcgtcgactctgat
ctaggggaggccatgagtgaatgcgaccctgacggtccgctgatgtgtcacacgacaaaa
atgtacagcacagacgatggtgttcagttccatgcctttggcagagtgctcagtggtacc
atccatgctgggcagcctgtgaaggtccttggagaaaactataccctggaagatgaggag
gattcccagatctgcactgttggacgtctctggatctcggttgcaaggtatcacattgag
gtaaaccgggttcctgctggcaactgggtgctgatagaaggagtggaccagcccatagtg
aagactgcaaccgtcacggaacctcggggcaatgaggaggctcagatcttccgtcccttg
aagttcaacaccacatctgttatcaaaatagctgtagagccagtgaacccctcggagctc
cccaaaatgttagatggtctccgcaaagtcaacaagagttacccctcgcttactactaag
gtggaagagtctggggagcatgtgatcctggggacaggggagctctacctggactgcgtg
atgcacgatctacggaagatgtattcagagattgatatcaaggtcgctgatccagttgtg
acattctgcgagacagtggtggaaacgtcctccctcaagtgctttgctgagacacccaac
aagaagaacaagatcacgatgattgctgagcctctggaaaagggacttgcagaggacatt
gaaaatgaagttgtccagataacgtggaacagaaagaagctgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttctatctgggcctttgggccagatgccact
ggcccaaacatcctagtagatgatacgctgccctcagaggtggacaagtcgctgctgggc
tctgtgaaggacagcattgtacagggatttcagtgggggaccagggaagggcctctctgt
gatgaattgatccgcaacgtgaagtttaagatcctggatgcagtgattgctcaggagccc
ttgcaccggggtggaggacagatcatcccaacagcccggagagtggtgtattctgctttc
ctgatggccacccctcgcttgatggagccctactactttgtggaggtacaggctcctgct
gactgtgtgtctgcagtgtacacagtcctggccagacggagaggccacgtgacacaagat
gctccgatcccgggctctcctctctacaccatcaaagccttcatcccagccattgattca
tttggctttgagacagacttgaggacccacacgcagggacaagctttctcgctctctgtc
ttccaccactggcagattgtgcctggtgaccccttggacaagagcatcgtcatccgaccc
ctggagccccagccagccccgcatctggccagagagttcatgatcaagaccaggcgtagg
aagggcttgagcgaagatgtgagcatcagcaagttcttcgacgaccccatgttgctggag
ctggccaagcaagatgttgttctcaactaccccatgtga
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