Haliaeetus leucocephalus (bald eagle): 104838385
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Entry
104838385 CDS
T08630
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58 isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle04622
RIG-I-like receptor signaling pathway
hle04623
Cytosolic DNA-sensing pathway
hle05164
Influenza A
hle05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104838385 (DDX58)
04623 Cytosolic DNA-sensing pathway
104838385 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104838385 (DDX58)
05168 Herpes simplex virus 1 infection
104838385 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hle04054
]
104838385 (DDX58)
Enzymes [BR:
hle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104838385 (DDX58)
Pattern recognition receptors [BR:
hle04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104838385 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_19
AAA_25
Motif
Other DBs
NCBI-GeneID:
104838385
NCBI-ProteinID:
XP_010576402
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MTAEEKRSLQCYRRYIEKSLNPVYILGNMTDWLSDEVKERVRKEEEKGVTAAAALFLDAV
LQLEAEGWLRGFLDALVAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATMLEVDPVA
LMPYINMCLIERECEEILQVSEYRSKAAGITKLIECLCRSDKENWPKSLQLALDNTGYYN
ASELWDIREDNGKGVDGEMTNASENSFETVVTFSEEAECDNNLSENLCSASEGIYQSSRV
YEPKKAWSYQTELAQPAINGKNTLICAPTGSGKTFVAILICEHHFQNMPLGQKAKVVFLA
TKVPVYEQQKTVFKQHFERSGYSVQGISGETVANVSVEKVIQDSDIIVLTPQILVNSIEE
GILGSLSIFTLMIFDECHNTTGNHPYNVLMSRYLEQKFDSASQLPQIVGLTASVGVGNAK
STKETIEHICTLCSYLDIQAISTVRENKLDLQRFTNKPETHVRWVKMRDQNHFADIISGL
MSETEALMRRIYSVDTISQINRNDFGTQKYEHWIVATQKKCRLLQLADKEKESSICRHLF
ICTEHLRKFNDALIISEDARIEDALAYLTEFFTNVKNGPYTELEKKLTAKFQEKEPELTA
LSKDESNENPKLEELACILEEAYRYNPDTHTLLFAKTRALVAALKKWIEANPLLSYIKPG
VLMGRGRRDQKTGMTLPMQKGVLDAFKTNKENRLLIATSVADEGIDISECNLVVLYEYFG
NVTKMIQVRGRGRAKDSKCILVTSKTEVVENEKHNRYKEEMMNEAIEKLQSWDETTFARK
IHDLQMKEKVLRDSRKKETRSKVVEGKKNLLCGKCKAYACSTDDIRVIKESHHTVLGDAF
KERYITKPHHKPVQFDCFEKKSKMYCQNTNCQHDWGIIVKYKTFDNLPVIKIKSFVLENV
ETGTQMDFQKWKNINFSLKNFDVEETSS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaggagaagaggagcctgcagtgctacaggcggtacatcgagaagagcctg
aaccccgtctacatcctgggcaacatgacggactggctgtccgacgaggtgaaggagagg
gtccggaaggaggaggagaagggggtgacggcggccgccgcgctgttcctggacgccgtc
ctgcagctggaggcggagggctggctgcggggcttcctggacgccctggtcgcagcaggg
tacactggactggcagaagcaattgaaaactgggacttcagcaaactggaaaaactagag
ttgcacagacagctgttgaagcggatagaagcaacaatgctagaagttgatccagtagca
ctcatgccgtacataaacatgtgcctgatagaaagggagtgtgaggagatcctgcaggtc
agcgaatacagaagcaaagcagctgggataactaaactcattgaatgtctctgtcgatcg
gataaggaaaactggccaaaaagccttcagctagcactagataacacaggatattacaac
gcaagtgaactgtgggatataagagaagataatggcaaaggtgtggatggtgaaatgaca
aatgcctctgagaacagctttgaaaccgtggtgacattttctgaagaagcagaatgtgat
aataatctcagtgaaaatctctgttcagcttcagaaggcatctatcagtcttcacgtgtt
tatgaaccaaagaaggcttggagctaccagactgaacttgcacagcctgctatcaatggg
aaaaacacattgatatgtgcccctacaggatctggaaaaacctttgtggcaattctgatt
tgtgaacaccatttccaaaacatgcccttaggacaaaaggcgaaagttgtctttcttgca
accaaagtgccagtgtacgaacaacagaaaactgtattcaagcagcattttgaaagaagt
ggatattctgttcaaggaattagtggtgaaacagttgcaaatgtctccgtagaaaaggtt
atacaggacagtgacatcattgtgctaacaccccagattcttgtgaatagcatcgaggaa
gggatccttggctccctctccatcttcactctgatgatatttgatgaatgccacaacact
actggcaatcacccttacaatgtgttaatgagtagatacctggaacaaaaatttgactct
gcaagccagctgcctcagattgtaggtttaactgcttctgttggagttggtaatgccaag
agcaccaaggaaacgatagagcacatctgtaccctctgctcctaccttgacatacaggcc
atatccactgtcagagagaacaaactggatctgcagagatttacaaacaagccagaaaca
catgtcagatgggttaaaatgcgagatcagaatcactttgcagacattatctcaggtctg
atgtctgagacagaggcgttgatgaggaggatttactcagtggacactatctcccaaatc
aacaggaatgattttggaacacagaaatatgaacactggatagttgccactcagaagaaa
tgcaggctgttgcaactggcagataaggagaaggagagcagcatttgtagacaccttttc
atttgcactgaacacctgcggaaattcaacgatgctcttatcatcagtgaagatgcccgc
attgaagatgctttagcctacctaactgaatttttcacaaatgtcaaaaatggaccatat
acagagttagagaagaaactgacagccaaatttcaagagaaagaaccagaactgactgcc
ctttcaaaagatgagtcaaatgagaatcctaagctggaagagcttgcttgcatcctggag
gaagcataccgctataacccagacactcacactcttctctttgctaagacaagagcctta
gtagctgctttgaagaagtggatagaagcaaaccctctacttagctacataaagccaggt
gtgttgatgggtcgtggaagaagagatcaaaaaacaggtatgaccctcccaatgcagaag
ggtgtgctggatgcattcaaaaccaacaaagagaacagactgctaattgctacatccgtt
gctgatgaaggcattgatatttctgagtgcaaccttgttgtgctctacgaatacttcggt
aatgtcaccaaaatgatccaagtcagaggtcgtggaagggcaaaagacagcaagtgcatc
cttgtgacaagcaaaacagaagtggttgagaatgagaaacacaaccgttacaaggaagaa
atgatgaatgaagctattgaaaagctacagagttgggatgaaacaacatttgcaagaaag
atacatgacctgcaaatgaaggaaaaggtattacgagactccaggaagaaagaaacaaga
agtaaggtagtggaagggaaaaaaaatcttctgtgtggaaaatgcaaagcgtatgcctgc
agtacagatgacatcagagttataaaggaatctcatcacactgtcctaggagatgcgttc
aaggagcgttacataacaaagcctcaccataaaccagtccagtttgattgttttgagaaa
aaaagcaagatgtattgccaaaatactaattgccagcatgactggggaatcatagtgaag
tacaagacatttgataatctaccagtgatcaaaatcaaaagttttgtattagagaatgtt
gaaactgggacacaaatggattttcagaaatggaagaatattaatttctctttgaagaat
tttgatgttgaagaaacatccagctga
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integrated database retrieval system
