Haliaeetus leucocephalus (bald eagle): 104840894
Help
Entry
104840894 CDS
T08630
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104840894 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hle03000
]
104840894 (KDM2B)
04121 Ubiquitin system [BR:
hle04121
]
104840894 (KDM2B)
03036 Chromosome and associated proteins [BR:
hle03036
]
104840894 (KDM2B)
Enzymes [BR:
hle01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
104840894 (KDM2B)
Transcription factors [BR:
hle03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
104840894 (KDM2B)
Ubiquitin system [BR:
hle04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104840894 (KDM2B)
Chromosome and associated proteins [BR:
hle03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104840894 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
104840894 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
LRR_4
Motif
Other DBs
NCBI-GeneID:
104840894
NCBI-ProteinID:
XP_010580487
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MPDPDFTVRDVKLLVGSRRIVDVMDVNTQKGVEMSMSQFVRYYETPEAQREKLYNVISLE
FSHTKLENIVKRPNVVDLVDWVDNMWPQHLKERQTDATNALSEMKYPKVKKYCLMSVKGC
FTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLQNLELYEEWVLSGKQSDIFLGDRVERCQR
IELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVHAKFRYP
FYYEMCWYVLERYVSCVTQRCHLSKEYQKESMLIDAKRKRSTDSYSSDSWLDMDEESCDA
HIREEKDDSLDKNSKCLVDGSSSPNSTHSEGKEGAERKQKATVMRYLKRTLSNESDDSVK
STTPTDYPKTPTGSPATEVSTKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQA
LLEDMKNILKEHADDDQNLAISGVPVVSWPKKTTKNRAVGRPKGKLGTASAVKLAANRTT
AGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCL
VCGEAGKEDTVEEEESKFNLMLMECSICNEIIHPGCLKVKESDGVVNDELPNCWECPKCN
HAGKTGKAYKQKRGPGFKYASNLPGSLLKEQKINRDNKEVTDAAKRKGDCEETPRRKSEE
HSKKTQVDSILRRKSDEVHLWRKRKFEKPQEPTMRKRLKLGREDKLFRKKRRSWKAPDDR
TAMIKPLRRLKQEPEDDLPEAPPRSKDSDQSRSSSPTAGPSTEGAEPRDKKKFKMRRKRR
LPNKELSKELSKELNQEIQKTENSLANENHQPIKSEPESENEEPKRALNNSERLHRFSKG
LNGTPRELRHQLIPSLRSAPRGITRPPPSLSPPKCIQMERHVIRPPPISPPPDSLPLDDG
AAHVMQREVWMAVFSYLSHRDLCICMRVCKTWNRWCCDKRLWTKIDLNHCKSITPLMLSG
IIRRQPVTLDLSWTNISKKQLSWLINRLPGLRDLLLSGCSWIAVSALCSSSCPLLRTLDV
QWAEGLKDAQMRDLLSPPTDNRPGQIDNRSKLRNIVELRLAGLDITDASLRLIIRHMPLL
SKLNLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSYFKRCGNICQIDL
RYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacccggatttcaccgtcagagatgtgaagctattagtgggaagccgacggata
gtggatgtgatggatgtgaacacacagaaaggtgttgaaatgagcatgtctcaatttgtg
agatactatgaaacaccagaggcccagcgtgaaaaactctacaatgtcatcagcctggag
ttcagtcacacaaagctggagaacattgtcaaacgccccaatgtggtggacttagtcgac
tgggtggataatatgtggccgcagcatttgaaggagagacagacggatgctaccaatgct
ctttcagagatgaaataccccaaagtgaaaaagtactgtttgatgagcgtgaaaggatgc
ttcactgattttcatattgattttggtggcacttcagtgtggtatcacgttttccgtggg
gggaagatcttctggctgattccgcctactctgcagaatctagaactttatgaagaatgg
gttctctcaggaaagcaaagtgatatctttctgggagacagggtggaacgatgccaaaga
attgagctgaaacagggctatacgttcttcattccttcagggtggatacacgcggtttat
actccagtagattctctggtgtttggtggaaatatcctgcatagctttaatgttcccatg
cagcttcgcatctatgaaattgaggacagaacaagggtgcatgctaaattccgttatcct
ttctactatgaaatgtgctggtatgttctggagagatacgtgtcctgtgtgacccagcgc
tgccacctcagcaaagagtaccagaaagaatcaatgttaattgatgcaaaaagaaaacgc
agcacagacagctattcatcagattcgtggttagacatggatgaagaatcttgtgatgcc
catatccgggaggagaaggatgacagcttggataagaactctaaatgcttggtggatggc
tcctcctcacccaacagcacacactcagaagggaaggagggtgcagaaagaaaacaaaaa
gccacagtaatgagatacctaaaaagaactttgtctaatgagtcggatgacagcgtaaaa
tcaacgacccccacggactatcccaaaacaccaacagggtctccagctacagaagtttca
accaaatggactcacctcacagaatttgaactgaagggtttaaaagccctggtggaaaag
cttgaatctctcccagagaacaagaagtgtgttccagaaggcatcgaagatcctcaggct
ctcctagaggacatgaagaacatactgaaggaacatgctgatgatgaccaaaatcttgcc
atttcgggtgtccctgtggtcagctggcccaagaagactacaaagaacagggcagtcgga
cggcccaaagggaaactgggcactgcttctgcggtgaagcttgcagctaatcggacaacc
gctggagcacgtcggaggaggacgcgatgccgcaagtgcgaagcgtgtctgcggacagag
tgcggcgagtgtcacttctgcaaagacatgaagaaatttgggggacctggcaggatgaaa
cagtcctgcattatgaggcagtgtatcgcaccggtgttgcctcatactgctgtgtgtctg
gtgtgtggagaagctgggaaagaggacactgtggaagaggaggagagcaagtttaatctc
atgctaatggaatgctccatttgtaatgaaatcatacacccaggatgccttaaggtgaag
gaatcggatggtgtggttaacgatgagctgccgaactgctgggagtgtccaaagtgcaac
catgcagggaaaactggaaaggcgtacaagcaaaagcgcggaccaggattcaaatacgca
tcaaatctcccaggctccttgctgaaggaacagaaaattaacagagacaataaggaagta
acagatgctgcaaaacggaaaggggattgtgaagaaactcccaggcggaaatcggaggaa
cattccaaaaagactcaagttgactcaatactgaggagaaagtcagacgaagtgcatctg
tggaggaaaaggaaatttgagaaaccccaggaacccactatgagaaagcggctaaaactt
ggaagagaagacaaactcttcaggaagaagcggcgatcgtggaaggctccagatgaccga
actgccatgatcaaacccctgcggcgcctcaagcaggagccagaggatgacctgccagaa
gcacctcccaggtccaaggatagtgaccagtcacggtccagctcgcccactgcaggtccc
agcacagagggtgccgagcccagggacaagaagaagttcaagatgaggaggaaaaggcgg
cttcccaataaggaactgagcaaggagctcagcaaggagcttaaccaggagatccaaaaa
accgagaacagccttgccaatgagaatcaccaacccatcaaatctgaacctgagagtgag
aatgaggaacctaagcgtgctttgaacaacagtgagagactccataggttcagcaaaggg
ttaaatgggactccccgggagctgaggcaccagctcatccccagcctgcgaagcgcacct
cggggaataacccggccaccgccttcgctctctcctcccaaatgcattcagatggaacgg
catgttatccggccgcctcccatcagcccccctccggactcactccccctggatgatggg
gcagcccacgtgatgcagagggaagtctggatggctgtctttagctacctcagtcataga
gacttgtgcatctgtatgagagtttgcaagacctggaacagatggtgctgtgacaaaaga
ttatggaccaaaatagatttaaaccattgtaaatccatcactccgcttatgcttagtggc
attattaggagacagcctgtaacccttgatcttagctggacaaatatatctaaaaagcag
ctgagctggcttatcaacagactgccaggtcttcgagacctgctgttatcagggtgctca
tggatagcagtgtcggcactttgtagttccagttgtcctttactccgaactctggatgtt
cagtgggcagaaggcctgaaagacgcacaaatgagagacctcttgtcgccgcccacagat
aaccggccaggtcagatcgacaaccggagtaaactacggaacatagttgagctgcgtttg
gctggcctggatattacagatgcttctttgcggctgatcataaggcacatgcctctgctc
tccaaactcaatctcagttactgtaatcacgtgacagatcagtctattaacctgctgacc
gcagttggaaccaccacgcgggattcattaacagaaattaatttatcagactgcaataag
gttactgaccagtgcctgtcttacttcaaacgttgtggaaacatctgccagattgatctg
aggtactgcaagcaagtgacaaaagaaggctgtgagcagttcatagcggaaatgtcagta
agtgttcagtttgggcaagtggaagaaaaacttctgcaaaaactgagttag
DBGET
integrated database retrieval system
