Haemaphysalis longicornis (longhorned tick): 144159309
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Entry
144159309 CDS
T11551
Symbol
Lsm3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
hlg Haemaphysalis longicornis (longhorned tick)
Pathway
hlg03018
RNA degradation
hlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144159309 (Lsm3)
09123 Folding, sorting and degradation
03018 RNA degradation
144159309 (Lsm3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlg03019
]
144159309 (Lsm3)
03041 Spliceosome [BR:
hlg03041
]
144159309 (Lsm3)
Messenger RNA biogenesis [BR:
hlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
144159309 (Lsm3)
mRNA degradation factors
5'-3' decay
Lsm complex
144159309 (Lsm3)
Spliceosome [BR:
hlg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
144159309 (Lsm3)
Complex C
U2 snRNP components
144159309 (Lsm3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
RimP_C
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
144159309
NCBI-ProteinID:
XP_077546842
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADDAEQAPATAVEEPLDLVRLSLDEKIYVKMRNERELRGRLHAYDQHLNMILGDVEETV
TSVEIDEETYEEVYKSTRRSIPMLFVRGDGVILVSPPVRTTT
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacgctgaacaggcacccgcaactgcggtggaagagccgctcgatttggtg
cgactgagcttggatgaaaagatctacgtcaagatgaggaacgaacgcgaactgcgtggc
aggttgcacgcgtacgaccaacatcttaatatgatcctcggcgacgtagaagaaacagtg
acaagtgtggagattgacgaggagacctacgaagaagtgtacaagagtacccggaggtcc
attcccatgctgttcgtgcgtggagacggcgtcattctggtctcgcccccagttcgaacg
accacctaa
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integrated database retrieval system
