Natrinema longum: J0X27_03350
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Entry
J0X27_03350 CDS
T07116
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hlo
Natrinema longum
Pathway
hlo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0X27_03350 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlo03400
]
J0X27_03350 (nth)
Enzymes [BR:
hlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J0X27_03350 (nth)
DNA repair and recombination proteins [BR:
hlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J0X27_03350 (nth)
Prokaryotic type
J0X27_03350 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Ogg-HhH
RecR_HhH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QSW85884
UniProt:
A0A8A2UB91
LinkDB
All DBs
Position
complement(694178..694861)
Genome browser
AA seq
227 aa
AA seq
DB search
MGTPRETPQAQAEAVVDRLEAEYPESTISLRYSNRLELLIAVILSAQCTDERVNKETKHL
FEKYDGPEDYATVDQDELAEDLNSITYYNSKAEYIRDSCGTILEEHDGEVPDTMDELTEL
SGVGRKTANVVLQHGHDIVEGIVVDTHVQRLSRRLGLTEEKYPERIEQDLIEIVPEDDWQ
QFTHLCIDHGRATCTAQNPDCHDCVLADICPSEKGDSGIDLASGDPW
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccccacgcgagacgccccaggcccaagccgaggcggtggtcgaccgcctcgag
gcggagtatcccgagtcgacgatttcgttgcggtactcgaaccgcctcgaactgctgatc
gcggtgatcctctcggcgcagtgtacggacgaacgggtcaacaaggagacgaaacacctc
ttcgagaagtacgacggccccgaggattacgcgaccgtcgatcaggacgaactcgccgag
gacctgaactcgatcacctattacaacagcaaggcggagtacatccgcgactcctgtggg
acgatcctcgaggaacacgacggcgaggtgcccgatacgatggacgaactgaccgagctc
tcgggcgtcggccgaaagacggcgaacgtcgtcctccagcacggccacgacatcgtcgag
ggaatcgtcgtcgacacgcacgtccagcggctctcacggcggctggggctgaccgaggag
aagtatcccgaacggatcgagcaggatctgatcgagatcgtccccgaggacgattggcag
cagtttactcacctctgtatcgaccacgggcgggcgacctgtacggcacagaatcccgac
tgtcacgactgcgtgctggcggacatctgcccctcggagaagggcgacagcgggatcgac
ctcgcctccggcgacccctggtaa
DBGET
integrated database retrieval system
