Humulus lupulus (common hop): 133791005
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Entry
133791005 CDS
T11341
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04075
Plant hormone signal transduction
hlp04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133791005
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133791005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlp03000
]
133791005
Transcription factors [BR:
hlp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
133791005
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_LHW
bHLH_NPAS4
PAC1
Motif
Other DBs
NCBI-GeneID:
133791005
NCBI-ProteinID:
XP_062084873
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Position
1:35138628..35140944
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AA seq
400 aa
AA seq
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MDSGFVELAWENDEIVRRRPPSTFMLSQRNSNSSTTAAAAVAGGDYNDNSSSQGHTLSKK
RGSLRTHTTNNYCYQDNHQPNTTPTRNVFELFSSPKQCNKLASNGGEDHHRARPVLLKDC
LNKSSSTFQDDHDRDLQPPMKIVNNKRPVQPAHDNSMCLVPDDHDDRQNPTLDQPHQTYY
DYDYPQNQEDAALVPSLNSVGASNDHHDHLPMTHNGRRHHSTATTTTLDQDEDEDHDHDQ
DQEQELQHNLSRKRSTKLHNLSEKRRRDKINKRIRTLKTLIPNCNKVDKASILDDAIDHL
KTLQFQLQMMSMGAGLNVMNPMMAQYLMSCFSPMAMAPVSPLIASRLGVQVFGFPAVSSS
VSQTSQPSASFMPWHVPVPPSPQIPRFQTPMNYYYSPQNN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggatagtggttttgtagaattggcatgggaaaatgatgagatcgttagacgacgtcct
ccatccaccttcatgttaagccaaaggaatagtaacagtagtactactgctgctgctgct
gttgctggtggagactacaacgacaactcatcatcccaaggccatacgctttctaagaag
agaggcagccttcgtactcataccactaataactactgctatcaggataatcaccagcct
aatactactcccacaaggaacgtgtttgagctattctcatcaccaaagcagtgtaataag
ttagcttctaatggtggtgaagatcatcatcgagctaggccagtactacttaaggactgc
ttgaacaaatctagcagtacttttcaagatgaccatgaccgtgatctgcaaccaccgatg
aagatagtgaacaataagcggccagtacagccagctcatgataattctatgtgcttggtc
cctgatgatcatgatgaccgccaaaaccctactttggatcaaccccatcaaacctactac
gactatgactacccccaaaaccaagaagatgctgcactcgttccctctttaaattcggtg
ggagcttcaaatgaccatcatgatcacctacccatgacgcataatggacgacggcatcac
agtactgctactactactactcttgaccaagatgaagacgaagaccatgaccatgaccag
gaccaagaacaagaactacaacataatctctcaagaaaaagatctacaaagctccataat
ttgtctgaaaagaggcgaagagacaagatcaacaagaggatacgcaccctaaaaactctc
atacccaattgcaacaaggttgacaaagcctcgatacttgacgatgccattgatcatctg
aagacacttcagtttcaattacagatgatgtcgatgggagcggggcttaatgttatgaat
ccaatgatggcgcaatatttgatgagctgtttctccccaatggcaatggcaccagtatca
ccactcattgcttctcgattaggagttcaggtgtttggcttcccagctgtttcatcttca
gtttcgcagacgtcacagccttcagcttcattcatgccttggcatgtaccagtaccacct
tctcctcaaattccaagatttcagacgccaatgaactactactactcaccacaaaacaac
taa
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