Humulus lupulus (common hop): 133817240
Help
Entry
133817240 CDS
T11341
Name
(RefSeq) transcription factor PIF4
KO
K16189
phytochrome-interacting factor
Organism
hlp Humulus lupulus (common hop)
Pathway
hlp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hlp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133817240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlp03000
]
133817240
Transcription factors [BR:
hlp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
133817240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
133817240
NCBI-ProteinID:
XP_062105681
LinkDB
All DBs
Position
2:complement(10102037..10106219)
Genome browser
AA seq
547 aa
AA seq
DB search
MNNIPDWNFDGDLPVNGQKNLTGANHDLVELLWRNGQVVLQSQTHRKASLGPNESRQVQK
NDQQAIRTGGSYGNSINMVQEDDAVPWIHYPLEDAFEKDFCSNFFSELPSCDPIDIDKSI
RHIDEERLSKFGGSDTTHALSTSQHHKLKPSSNGAVPCPENHHMPPPRLHYSNSTHQKQN
LGPLGKVVNFSQFSTVGKCDVRPQQHVAVKETGTQGEVRECSVMTVGLSHCGSNQLAADL
DVSWVSSNNGDGTTGLSAGAFKDDVQKILPRSESGKTETLEPTVTSSSGGSGSSFGRTCK
QSTATTGANNNNKRKNRDAEELECQSDVAEHESAAANKSSQRSGSSRKSRAAEVHNLSER
RRRDRINEKMKALQELIPHSNKTDKASMLDEAIEYLKSLQLQLQVMWMGSGMAPMMFPGV
QHYMSRLGMGMAPPALPSIHNPMHLPRVPVVDQSMIGPPTTDQSVLCQTPGFNPINYQNQ
MQNASFQEQYARYLGFHPMQTVSQPMNLFRFNPQALQQSQSIAQQGISTAPSNSGIPTNG
ALTGKMG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaataacattcctgattggaattttgatggcgatctccctgtgaatggccaaaagaat
cttactggggctaaccatgacttagtagagctcctatggcgaaatgggcaggtagtttta
caaagccagacacacagaaaagcgagtcttggacctaatgaatccagacaagttcaaaaa
aatgaccaacaagctataaggactggtgggtcatatgggaattcaatcaatatggttcaa
gaagatgacgcagtgccctggattcattaccctcttgaagatgcctttgagaaagatttt
tgttccaattttttctctgaattaccttcctgtgatccaattgatattgataaatctatc
agacatattgatgaagagaggttatcaaagtttggtggttctgatacaactcatgctctc
tcaacctcccaacaccacaaactcaagccctcctccaatggtgcggtgccttgtcctgaa
aatcatcacatgcctcctccaaggctccattacagcaattcaacccatcaaaaacagaac
ctgggacccttaggaaaagtggtcaatttctctcagttttctaccgtggggaagtgtgat
gtgaggccacaacaacatgtggcagtgaaagaaaccgggacccaaggagaggtcagagag
tgttcagtaatgacagtcgggttgagccactgtggaagcaaccaacttgcagctgacctt
gatgtgagctgggtttccagtaacaatggcgatgggaccactggtttgtctgcgggagct
ttcaaggacgatgttcagaaaatcttgcctcggagtgagagtggaaagactgagactctt
gagcctactgttacttcatcttctggtgggtctggaagcagttttggaagaacttgcaag
caatctacagctacaactggtgccaataacaataacaaaagaaagaatagagatgcagag
gaactagagtgccaaagtgatgttgctgaacatgaatctgctgctgcaaataagtcatcc
caacgatctggttcatcgcgaaagagccgagctgcagaagttcataatctttcagaaagg
agacgaagagatcgaataaatgagaagatgaaggcactgcaagagctcatacctcatagt
aacaagacagataaggcatcaatgttggatgaagcaattgagtacttgaagtcacttcaa
ttacaactccaagtaatgtggatgggaagtgggatggcaccaatgatgtttccaggagta
cagcactacatgtcacggctgggcatgggaatggctccacctgccttgccttccattcac
aacccaatgcatttgcccagggtcccagtggttgatcaatccatgattgggcctccaact
acagaccaatctgttttgtgccaaaccccaggttttaaccccataaattaccagaaccag
atgcaaaacgcctcttttcaagagcaatatgcacgttacttggggttccatcctatgcaa
acagtttctcagcctatgaacttgttcagatttaatccacaagcattacaacagagtcaa
tctatagcacaacagggcattagcaccgcaccttcaaattctggaattccaactaatgga
gctttaactggcaagatgggttga
DBGET
integrated database retrieval system