Haloarcula marismortui ATCC 43049: pNG7116
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Entry
pNG7116 CDS
T00211
Symbol
nthC
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
pNG7116 (nthC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hma03400
]
pNG7116 (nthC)
Enzymes [BR:
hma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
pNG7116 (nthC)
DNA repair and recombination proteins [BR:
hma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
pNG7116 (nthC)
Prokaryotic type
pNG7116 (nthC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH_5
HHH
Ogg-HhH
DUF2400
DUF7661
Motif
Other DBs
NCBI-ProteinID:
AAV44827
UniProt:
Q5V6M5
LinkDB
All DBs
Position
pNG700:113006..113707
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AA seq
233 aa
AA seq
DB search
MSMTEEWDAASVRDLHDDLVSLHGPVERTSDHGADASADPGEGVRQLVTTILSQNVADEN
TRRASEALFTAYSDFAAIESADHDELADTIRVAGLPDQKAARIQRALAAIREETGGAYSL
AFLDAMPTDEAKGWLTDIKGVGPKTASVVLNFHFGKPTMAVDTHVERVSKRFGLVTESAT
NKRAHDELDAIIPDELTYPLHVLLITHGREFCSARSPDCANPVCERYCSCEEC
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgactgaggagtgggacgccgccagtgttcgtgacctccacgacgacctcgtc
tcgctgcacggcccggtcgaacgcacaagcgaccacggcgccgacgccagcgccgaccct
ggcgaaggagttcgacagttggtgacgacgattctctcacagaacgtagccgacgagaac
acacgccgagcctccgaggcgctgttcacggcatacagcgacttcgcagccattgaatcg
gcagaccacgacgaactggccgacaccatccgcgtcgcagggctccccgaccagaaggcc
gcccgcattcagcgggcgcttgcggccatccgcgaggaaaccggtggggcctactctctt
gccttccttgacgccatgccaaccgacgaggcgaaaggctggctcaccgatatcaagggc
gtcggcccaaagaccgccagcgtcgtcctgaacttccacttcgggaagccgacaatggct
gtcgacacccacgtcgagcgggtctccaagcggttcgggctggtaaccgaatcagcaacg
aacaagcgcgcccacgacgagctagacgcaatcattcccgacgaactgacctatccgctg
cacgtcctgctgattacccacggccgggagttctgctcagcgcgcagtcccgactgcgct
aaccccgtctgcgagcgctactgcagttgcgaggagtgctag
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