Haloarcula marismortui ATCC 43049: rrnAC1908
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Entry
rrnAC1908 CDS
T00211
Symbol
nthD
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
rrnAC1908 (nthD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hma03400
]
rrnAC1908 (nthD)
Enzymes [BR:
hma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
rrnAC1908 (nthD)
DNA repair and recombination proteins [BR:
hma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
rrnAC1908 (nthD)
Prokaryotic type
rrnAC1908 (nthD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
Ogg-HhH
HHH
DUF2400
Motif
Other DBs
NCBI-ProteinID:
AAV46783
UniProt:
Q5V120
LinkDB
All DBs
Position
I:complement(1702587..1703423)
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AA seq
278 aa
AA seq
DB search
MTDKEPAENISGGTAGGGQSATFDPETAGTRAETVVDRLGEMYWTKTYGGRDAYECLVRT
ILSQNTSDKASQPAHDDLMARYGGGEDANSEGDIDSTDLARALADADQPELAETISSAGL
YNQKSERIIALAQRICEEYGGEAGFDAFVRDSDPEAVRSTLLDMNGVGPKTADCVLLFAG
GRGGVFPVDTHVHRIARRMGLAPADADHETVRAYLERDVPAAKCGFGHTAIIQFGREYCS
ARKPACLDDPDACPLAGHCDQIGVYPAADDVVDPSETA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaggaaccagcggagaacatcagcggcggaaccgctggcggtggccagtcg
gcaacgttcgacccggaaacagcggggacgcgggcagaaaccgtcgtggaccgtctcggc
gagatgtactggacgaaaacctacggcggccgggacgcctacgagtgtctcgtccggacg
attctcagccagaacacatccgacaaagcgagccagccggcccacgacgacctgatggct
cggtatggcggcggggaggacgcgaacagcgagggagacattgacagcactgacctcgcc
cgcgcgctggccgacgccgaccagcccgaactcgctgaaaccatctcctcggccgggctg
tacaaccagaaatccgagcgcatcatcgcactggcacagcgcatctgcgaggagtacggc
ggcgaagctggctttgatgcgtttgttcgggacagcgaccccgaggcggtgcggtcgacg
ctgctcgacatgaacggtgtcgggccaaagaccgctgattgcgtcctgctgttcgcaggc
ggtcgcggcggcgtgttccccgtcgatacgcacgtccaccgcatcgcccgccggatggga
ctggccccggccgacgccgaccacgagaccgtccgtgcgtatctggagcgcgacgtgccc
gcggcgaaatgcggcttcggccatacggcgataattcagtttggccgggagtactgctcg
gccagaaagccggcctgtctggacgaccccgatgcgtgcccgctggcgggtcactgtgac
cagatcggcgtgtacccggccgctgatgatgttgtcgacccatccgaaactgcctga
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