Hyphomicrobium sp. MC1: HYPMC_4395
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Entry
HYPMC_4395 CDS
T01557
Symbol
mcl
Name
(GenBank) malyl-CoA lyase/beta-methylmalyl-CoA lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00630
Glyoxylate and dicarboxylate metabolism
hmc00660
C5-Branched dibasic acid metabolism
hmc00680
Methane metabolism
hmc00720
Other carbon fixation pathways
hmc01100
Metabolic pathways
hmc01120
Microbial metabolism in diverse environments
hmc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HYPMC_4395 (mcl)
00660 C5-Branched dibasic acid metabolism
HYPMC_4395 (mcl)
09102 Energy metabolism
00720 Other carbon fixation pathways
HYPMC_4395 (mcl)
00680 Methane metabolism
HYPMC_4395 (mcl)
Enzymes [BR:
hmc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
HYPMC_4395 (mcl)
4.1.3.25 (S)-citramalyl-CoA lyase
HYPMC_4395 (mcl)
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
CCB67604
UniProt:
F8JBZ0
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All DBs
Position
complement(4227591..4228547)
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AA seq
318 aa
AA seq
DB search
MSFSQFPLRKQRLQRSYLAVPGSNPSMIDRAIKSAADYVFLDCEDAVAPPEKEQARKNII
QALNDLDWKGAGKSVSVRINGLDTHYMYRDVVDICEQAGAKLDTILIPKVGVPADVYTVE
CIVSQIEVAKGLKNQIGTEALIETPLGMANVEAIASAPSRLESMHFGVADYSAFNKARTV
VIGGLNPDYPGDQWHFPLSRMTVACRAYGLRPIDGPFGGIDDPEGYKAAARRGAALGMEG
KWAIHPSQIELANEIYSPTAKEVERAERILVALKEAEAQGKGAASLDGKMIDAASEKMAR
NLLVTAAAIKAAEAARAK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttcgcagttcccgctccgcaaacagagattgcagcgttcatacctcgcggtt
ccgggctccaacccgagcatgatcgaccgcgccatcaagagcgccgccgactatgtcttc
ctcgattgcgaagacgctgttgcgccgcccgaaaaagagcaggcccgtaagaacatcatc
caggcgctgaacgatctcgattggaagggcgccggcaagagtgtctcggttcgcatcaac
ggcctcgacacccactacatgtatcgtgacgtcgtcgacatttgtgagcaggctggcgcc
aagctcgacacgatcctcatcccgaaggtcggcgttcctgccgacgtctacacggttgaa
tgcatcgtcagccagatcgaagtcgccaagggcctgaagaaccagatcggcaccgaggcg
ctcatcgaaacgccgctcggcatggccaacgtcgaagccatcgcttctgctccaagccgt
ctggaatcgatgcacttcggtgtggccgattactccgccttcaacaaggcgcgcaccgtc
gtcatcggcggcctgaaccccgattatccgggcgatcagtggcacttcccgctgtcgcgc
atgaccgttgcctgtcgcgcttacggtcttcgtccgatcgacggaccgttcggcggcatc
gacgatccggaaggctacaaggcagcagcgcgccgtggcgcggctctcggcatggaaggc
aagtgggccatccatccctcgcagattgaactcgcgaacgagatctattcgccgaccgcc
aaggaagtcgagcgcgctgagcgcattctcgtcgctctgaaggaagccgaagcccagggt
aagggcgccgcttctctcgacggcaagatgatcgacgcagcctcggaaaagatggcgcgt
aacctgctcgtcacggctgccgcgatcaaagccgcagaagctgcgcgcgcgaaataa
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