Hyphomicrobium sp. MC1: HYPMC_4463
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Entry
HYPMC_4463 CDS
T01557
Name
(GenBank) Efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc01501
beta-Lactam resistance
hmc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYPMC_4463
01503 Cationic antimicrobial peptide (CAMP) resistance
HYPMC_4463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmc03036
]
HYPMC_4463
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmc02000
]
HYPMC_4463
01504 Antimicrobial resistance genes [BR:
hmc01504
]
HYPMC_4463
Chromosome and associated proteins [BR:
hmc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HYPMC_4463
Transporters [BR:
hmc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HYPMC_4463
Antimicrobial resistance genes [BR:
hmc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HYPMC_4463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
YknX_C
RND-MFP_C
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
HH_EMRA
HH_AAEA_pHBA
TcpF
Motif
Other DBs
NCBI-ProteinID:
CCB67672
LinkDB
All DBs
Position
4300933..4302120
Genome browser
AA seq
395 aa
AA seq
DB search
MRVWKAALLGLIAIGGVAAYAYRAEIPKLLAEVESTGAPPHQGAFVMPVPVASVVKRPVS
IYLDYPARTESINNITLQARVSGYLQVQHVPDGSDVKEGTLLYTIDPRDYQAALDRAKAE
KQRDIAARDYAQSNLQRGTELTKSGWLAKDTFDQRSSSLRQSEAAINIDDAAIRTAELNL
EYTQIRAPFSGRLGKNQAPIGTLISVAGAPLNTLVQLDPIYVTFNPSETDLDTIEKVRKS
GAIAAEVFVPGDSKPPHKGKITFVDNAVDHLTGTLTARATIANADYGLLPGQYVRIHVHA
GENPNALMVPQTAIGSSQLGKYVYVVGPKNIAEQKLVTLGPTEGDLVSVVGLEEKDLVIT
GNLQKIGPGSPVQPLTAPPPQANKAALQTGSTTVN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtttggaaagcagctcttctcggattgatcgccatcggtggcgtagcggcctat
gcctatcgggcggagatcccaaagctccttgccgaggttgaaagcaccggcgccccgccg
catcagggtgcgttcgtcatgccggttccggtcgcgtcggtcgtgaagcgtccggtcagt
atctatctcgattatccggcgcggaccgagtcgatcaataacatcacgctgcaagcgcgc
gtctccggttaccttcaagtgcagcacgtgcctgacggttctgatgtcaaggaaggcacg
ctgctttatacgatcgacccacgcgactatcaggctgcgctcgaccgggcgaaggccgaa
aagcagagggatattgccgcgcgcgattacgcccaatcgaatctgcagcgcggaaccgag
ctgacgaaaagcggctggctcgccaaagatacatttgaccagcggtcgagttcgttgcgc
cagagcgaggctgcaatcaacatcgacgatgcagccatccgcaccgccgaactcaatctc
gagtacacgcaaatccgcgcgccgttctcaggccggctcggcaagaaccaagcgccaatc
gggacgctgatcagcgtcgcgggtgcgccgctcaacacgctcgttcaactcgatccgatt
tacgtcacgttcaacccgtcggaaacggatctcgatacgattgagaaggtgcgcaagagc
ggagctattgcggcagaggtcttcgtgccgggcgacagcaagccgccgcataagggtaag
atcacgttcgtcgacaatgcggtcgaccatctgacgggcaccctgaccgccagggcgacg
attgcgaacgccgactatgggctgctgccgggtcaatacgttcgtattcatgtgcacgcc
ggtgaaaacccaaatgctctgatggttccgcaaacagcgatcggttcaagccagcttggc
aaatacgtctatgttgtcgggccaaagaatattgccgagcaaaagctggtaacgctcggg
ccgactgaaggcgatctcgtcagcgtggttggactggaagagaaggatctcgtgattaca
ggcaatctgcagaagatcggtccaggatcgccggtgcagccactcacggcgccgccgccg
caagccaacaaagctgcgcttcagaccggcagcacgacggtcaattaa
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