Hydra vulgaris (swiftwater hydra): 100200766
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Entry
100200766 CDS
T01080
Name
(RefSeq) msx2-interacting protein
KO
K25100
Msx2-interacting protein
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100200766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
100200766
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
100200766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_occluded
RRM_PARP14_3
RRM_7
RRM_MARF1
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
100200766
NCBI-ProteinID:
XP_047138178
LinkDB
All DBs
Position
8:21855605..21909238
Genome browser
AA seq
1185 aa
AA seq
DB search
MVRESRHLWVGNLPETVREEQIQDYFSRYGRVEKVKLLAKTSPDGGRAAFVDFVDIRSAT
KANEAQNRMGERDLRTNYNEPGAKNLMDFRGHAMHRIHGTYPSGIGNQPVVIYAAAPGDH
LIHSQAYRPLYHREEKRVSTYTPLKRDKSPGRSSLSDGSPSVKRSREYSSDYIDSDDNSV
RSSSVIIKNLSRNTDSELEEGIYHEFRKAGEITKIKIKGTGADRYAIVKFSKPEEAEKAT
HSTGRLFQGQTIRVLIRGNKKSRNHSPEKDDLAFDPHATRTVFVGNIEKTMMHGELRSIF
ERFGDVVDVDIKKMQTGQTTYAFVQYIDINGAMFAKRKMDREYIGHTIVKIGYGRGTPTN
CLWIGNLPTNVVDHQLSKIFHPFGYVQHCLIDKRFWQALIRFETIEACTHAFAEMHGKHF
QGKRLAVDYASPACRDGFYRRMEEDGQLDRRQLEPSPTPPDAHINFQNVARGGAFQPRGN
NYVFKSYAASGDSRSYAEYHPEFGYEKGERDMYGRDKERPRGYSPMSHGSNSPKHLYSPK
HTLSRESISPVSSLGFYDRKYRNEERKRKHNYLSSPVHEGHAKKKEKRKKKDKKEKQDKD
IEFGYPPVGITSPPLKSLKDAKREKKEKKKKDKVRRKSERKQKKILKLKNLQEKLNLNEP
GVDGVLSMSLQNIKPEHNFTANDRLHNKDTEQMKLGEIKQENDVVNALVISNYEQDNNNV
LGGTKMVAVNNMETYSFDKDQLFKTEQCNDKQVVDEIKKTVASPEEGELNEEDGKTSINQ
LAGSPISQDNTTNNVIKYTARLQPVDKVLSSIPATNKVKVEVQRSSYNEESSDSSDCTSS
DSDSSDSSDDSDNKKLNYKRHSCLREDKKVFDKAREPKAYRQSNRDDFDRREHRAERDRE
KEYHRSKYSSSDSIRRSPSRSVKSKSPNSSPGCYLKRDNSYDKKNVRSPYSKSPLHSLER
KDHYDQHSRRTHTPPPPPPLIDKVKHPTSIVSNGQIAYSRENVLPSSSTASQSADTLMDL
LRRYPVMWQGLLGLKNDTAAVQMHFLSGNVRIAESSLPRAAQPNEVPPTLRISQRMKLET
SQLEGVDKRIQLIKEHCMLLALPCGRDPLDVHAQTRALKTGFITYLQQKQAAGIVNTAIQ
SKQTTFVIHIFPPCEFAQGHLARVAPDLLNSAADSGHLMVLISPM
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggtcagagaatcgcggcatctctgggtgggaaatctaccagagacagttcgcgaagaa
caaattcaagactatttttcaagatatgggcgagtagagaaagtaaagcttctggctaaa
actagtcctgatggtggacgggctgcctttgttgattttgtggatattcgttcggcaaca
aaagccaacgaagcacaaaatcgcatgggagaaagagatttaagaactaattacaatgaa
cctggagctaaaaacttaatggattttagaggtcatgcaatgcatagaattcacggaaca
tacccgtctggaattggcaaccaacctgttgttatatatgcagcagcaccaggagatcat
ttgattcattcacaagcttatcgtcctttataccatcgagaagaaaaaagagtatctaca
tatacaccactaaagcgagataaaagtccaggtcgtagtagtctctcagatggcagtccc
agtgttaagcgttcacgcgaatattcaagtgattatattgatagtgatgacaattcagta
cgatcaagttccgttattattaaaaatctttctagaaatacagattctgagttggaagaa
ggaatatatcatgaatttcgtaaggctggtgaaataacaaaaatcaagatcaagggaaca
ggagctgatcgttatgcaatcgtaaaattttcgaaaccagaagaagccgaaaaagctact
catagtactggaagactttttcaagggcaaacaatacgtgtgttaattcgtggcaataag
aaatcacgtaatcactctccagaaaaagacgatcttgcatttgatccacatgctactaga
actgtttttgttggtaatatagaaaaaactatgatgcatggtgaactgagaagtatattt
gaaagatttggagatgttgttgatgttgatattaaaaaaatgcaaacaggacaaacaaca
tatgcatttgtgcagtatatagatattaatggtgctatgtttgcaaaacgtaaaatggac
agagaatatattgggcataccattgttaagattggttatggacgtggaacacctactaat
tgtttgtggattggtaatcttcctactaatgttgttgatcatcagctttctaaaatattt
catccatttggctatgttcaacactgtctaattgataaaaggttttggcaggctcttatt
cgttttgaaacaattgaagcttgtacacatgcttttgctgaaatgcacggaaagcatttt
caagggaaacgccttgctgttgattatgctagtcctgcttgtcgtgatggattttatcgg
cgtatggaagaagatggtcaactagatcgacgtcaactagaaccttctcctactcctcct
gatgctcatattaactttcaaaatgttgctagaggaggagcatttcaacctcgaggtaac
aactatgtttttaaatcttatgctgcatcaggtgactcccgatcatatgctgaataccac
cctgagtttggttatgaaaaaggagaaagagatatgtatggaagagataaagaacgacca
cgtggatattctcccatgtctcatggaagcaattctcctaaacatttgtactctcctaaa
catactttatcacgtgaatctataagccctgttagtagtttagggttttatgaccgcaaa
taccggaatgaagagagaaagagaaaacataattatttaagctcacctgtacatgaaggt
catgctaagaaaaaagaaaagcgcaaaaaaaaagacaaaaaagagaaacaggataaagat
attgagtttggatacccgccagtaggtattacttctcctcctttaaaatctttgaaagat
gctaaaagggagaagaaagaaaaaaaaaaaaaagataaagttcgtagaaaatcagaaaga
aaacagaaaaaaattctgaagttgaaaaatctacaagaaaaattgaatcttaatgaacca
ggtgttgatggagttcttagtatgtctctgcaaaatattaaaccagagcataatttcact
gcaaatgatagattacataacaaagatactgaacaaatgaaattaggtgaaattaagcaa
gaaaatgatgttgttaatgctttagtgattagtaattatgaacaagataataataatgtg
cttggtggaacaaaaatggttgcagttaataacatggaaacttattcttttgataaagat
caattatttaaaactgaacaatgcaatgataagcaagttgttgatgaaatcaaaaaaaca
gttgcatcacctgaagaaggagagttaaatgaagaggatggaaaaactagcatcaaccaa
ctggctggttctcctatctctcaagataatactactaataatgtcataaagtatacagca
agattacaacctgtagataaggttttatccagtatcccagcaacaaataaagttaaagta
gaagttcaaagatcctcttataatgaagaatcttcagattcaagtgattgcacatcatca
gatagtgattcttccgacagttctgatgactctgataataaaaaacttaattataagcgg
cattcatgtcttcgtgaagataaaaaagtttttgataaagcaagagaaccaaaagcatac
agacaaagtaatagagatgattttgatcgacgtgagcatcgtgctgagcgtgacagagaa
aaagaatatcatcgatcaaagtattcaagttctgattctattcgtagaagtcctagtaga
agtgtaaaaagcaagtctcctaatagttcaccaggatgttatctcaaacgtgataactca
tatgataaaaaaaatgttcgtagtccttatagtaaatctcctcttcattctttggagcga
aaagatcattatgatcaacatagcagaagaactcatacacctccacctccacctccgcta
attgataaagttaaacatcctacttccattgtaagtaatggacaaattgcttactctagg
gaaaatgtattaccatctagtagtactgcttcacaaagtgctgacacattgatggattta
ctaagaaggtatccagtgatgtggcaaggtcttcttggtttaaagaatgacacagctgct
gttcaaatgcattttttgtcaggcaatgtacgcattgcagaatcttctttaccacgagct
gctcaacctaatgaagtccctccaactttaagaatttctcagcgaatgaaactggagaca
tctcagttagaaggtgttgataaaagaatacagttaataaaagagcattgtatgttgcta
gcattaccttgtgggcgtgatcctcttgatgttcatgcgcaaactcgagcattgaaaaca
ggttttataacatacttacagcagaagcaagctgctggaatagttaacacagctatacaa
tcaaaacagacaactttcgtcatccatatatttccgccttgcgaatttgctcaaggtcat
ttagctcgtgtcgctccagatctcctaaacagtgccgctgacagtggccatttaatggtg
cttatttcacccatgtag
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