Hydra vulgaris (swiftwater hydra): 100204448
Help
Entry
100204448 CDS
T01080
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04120
Ubiquitin mediated proteolysis
hmg04144
Endocytosis
hmg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100204448
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100204448
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100204448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
100204448
04121 Ubiquitin system [BR:
hmg04121
]
100204448
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100204448
Membrane trafficking [BR:
hmg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100204448
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
HECT type E3
100204448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
WW_TCERG1
DUF4621
Motif
Other DBs
NCBI-GeneID:
100204448
NCBI-ProteinID:
XP_047135250
LinkDB
All DBs
Position
1:52851910..52947324
Genome browser
AA seq
815 aa
AA seq
DB search
MATAPDGSPRTKFYQLHCKVIGSNIKQITGGWFTGKGDYYAEIIVDGEPARKTEVMKKTL
HPKWNEIFTVLVTPYSQIEFRVMMKQSMRTDQVVGSTKVALYDVLKQNNGKLDMFESKWP
IIYKDKGKDISSGDIDVLFDNMRIIMDEYPLLNSNVSAASTPSSVSLSSSGPSGSATNIS
NSRIAPQYSSPNLPANLNQQPTPSRPPRPVTNSLSNGPVPPRPPPPTNPRVGSNDNEEPL
PPGWERRVDQYNRVYYVDHTTRSTLWERPKPLPAGWEMRVDGRGRTYYVDHNTRTTTWQR
PTAETVNAYNMWRTQQQSNLNQEHSLYQQRYLNMNMENPQPDVTDPLGPLPPGWEKRTDQ
TGRVYFVNHNSRKTQWEDPRASGSEMLDQKPLPPNWEMRYTPDGVPYFVDHNTRTTSFND
PRTGLPLVQAAGAIAYERSFRFKLMQFRHLCQANSLPSHVKIVVSRTNVFEDSFQQIMRI
PPHDLRRRLFINFKGEEGLDYGGVAREWFFMLSREIMNPMYCLFEYSGKGSYTLQINPAS
YVNPDHLEYFRFIGRVIAMALYHGKFIDRGFSMPFYKRMLDKKLTITDMETIDNEFYQSL
LWIKENSIDNCGLDLTFATDMEVLGKLTEHELKVGGKEIEVTDANKSEYIELITDWRFSR
GVVDQTKSFLSGFNEVLPMYWLQSFDERELETLLCGMQEYDLDDWQRNTVYRTYQKTSKQ
ILWFWQAVKSFDNEKKSRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIEKVGKETWLPRS
HTCFNRLDLPPYRSYEQLLEKLTFAIEETEGFGQE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcccctgatggatctccaagaacaaagttctaccaattacattgcaaagtc
attggatctaacataaagcagataactggaggctggtttacgggaaaaggtgattattat
gcagaaataattgttgatggagagccagcacggaaaactgaagtcatgaaaaaaacattg
catccaaaatggaatgaaatatttactgtacttgtgactccatatagtcagatagagttt
cgtgtaatgatgaaacaatcaatgcgaacagaccaagttgtaggctcaacaaaagtggct
ttatatgatgttcttaaacagaacaatggaaagttggatatgtttgaaagcaaatggccg
atcatttacaaagacaaaggaaaagatatatccagtggagatattgatgttttgtttgat
aacatgcggattattatggatgagtatccactgctgaatagcaatgttagtgcagcttct
acaccatcatcagtatctttatcaagctcaggtccatcaggatctgccactaatatttca
aattctagaattgctccacaatatagctctcctaatctacctgcaaatttaaaccaacaa
ccaaccccttcaaggccaccaaggccagtaacaaatagcttatcaaatggaccagttcca
ccacgtcctcctcctccaaccaatccaagagtcggatcaaatgataatgaggaaccgttg
cctcctgggtgggagcgacgagttgatcagtataatagagtctactacgtcgatcatact
acacgatcaacactttgggaaagaccaaaaccattacctgctggatgggaaatgagagtt
gatggtcgcggtaggacgtactatgttgaccataacacacggacaacaacgtggcagcgg
cctactgcagaaacagtaaatgcatataatatgtggagaacacaacaacagtcgaatcta
aatcaagaacattcattatatcaacagcgttatcttaacatgaatatggaaaatccacaa
cctgatgttacagatcctcttggtcctttaccacctggctgggagaaacgaacagatcaa
actgggcgtgtgtattttgtaaaccataacagcagaaaaacacaatgggaagatcctcga
gcatctggatcagaaatgttagatcagaaacctttacctccaaattgggaaatgaggtat
actccagatggtgtaccatactttgttgatcacaacacaaggacaacatctttcaatgat
ccgagaaccggcctgcctttagttcaagcagctggtgctatagcatacgaaagaagtttt
cgttttaagttaatgcagttcagacacctttgccaagctaactctttaccgagtcatgta
aaaattgttgtctcacgaacaaatgtttttgaagattcttttcagcaaattatgagaatc
ccaccacatgatttacgaagaagattatttattaactttaaaggagaagaaggattggat
tatggaggtgttgctagagagtggttttttatgctttctcgagaaattatgaatccaatg
tattgtttatttgaatacagtggaaagggatcatacacacttcagattaacccagcttcc
tatgtaaatccagatcatttggaatattttagatttattggtcgtgtcatagcaatggca
ctttatcatggaaagtttattgaccgtggatttagtatgccattctataaacgtatgctt
gataaaaagttgacaataacagatatggaaacaatagataatgaattctatcaatctctt
ttatggataaaggaaaatagtatagacaattgtggacttgatcttacgtttgctaccgac
atggaagtacttggaaaactaacagagcacgaacttaaagtaggcggaaaagaaatagaa
gttacagatgccaacaaatctgaatatatagaattaattactgactggagattttcaaga
ggtgtggtagatcaaactaaatcatttttaagtggatttaatgaagttcttcccatgtat
tggcttcaaagttttgatgaaagagaattagagactcttttatgtggtatgcaagagtat
gatcttgatgattggcaacggaacactgtttatcgaacgtatcaaaaaacatctaaacag
atcttgtggttctggcaggctgtaaaatcatttgataatgaaaagaaatcacgtttatta
cagtttgttactggaacttgtcgactaccagttggtggatttgctgagttaataggaagt
aacggtccacaaaagttttgtatagagaaggttggtaaagaaacatggcttccacgaagt
catacatgcttcaatcggttggatcttcctccataccgaagttatgaacagttactagaa
aagcttacatttgcaattgaagaaactgaaggatttggacaagaatag
DBGET
integrated database retrieval system
