Hydra vulgaris (swiftwater hydra): 100205553
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Entry
100205553 CDS
T01080
Name
(RefSeq) intraflagellar transport protein 122 homolog
KO
K19656
intraflagellar transport protein 122
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hmg03037
]
100205553
Cilium and associated proteins [BR:
hmg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
100205553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Zn_ribbon_IFT122
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Zn_ribbon_IFT122_C
EIF3I
ANAPC4_WD40
Beta-prop_EML
TPR_IF140-IFT172
TPR_GEMI5
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
TPR_7
NBCH_WD40
TPR_IFT80_172
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
Beta-prop_IFT140_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
WD40_RFWD3
TPR_12
TPR_2
ADD_ATRX
Beta-prop_WDR75_1st
Clathrin
Motif
Other DBs
NCBI-GeneID:
100205553
NCBI-ProteinID:
XP_047146873
LinkDB
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Position
13:complement(25769200..25835826)
Genome browser
AA seq
1196 aa
AA seq
DB search
MRAIPTWVDKVHDKDETPVSLHDLAFSPDGSQLIAAAGNKVLVYDASDGSLIRPCNGHKE
TVYCVAYAKSGKHFASGGADKTVIIWTNKLEGILKYTHNSVIQALQYNPITHQLASCSMD
DFGLWSTEQKSVQKYKLPCRSLCCSWTNDGQYLAIGLTNGFVTIWNKSGEEKVRIERPGG
FPIWTLSWNPSKDESDILAVGDWGQRLSFYQLSGKQIGKDYSLGFDPCCLSYFPKGEFLI
VSGSDKKCYLYTKEGTRLAIIGEHEGWVWSCKIGPEGNYVACGSEDGTVAYYQLIFSTVH
GLYKDRYAYRDNMTDVIVHHLTTEQKVRIKCRELVKKIAIYKHRLAVQMPEKIVIYEIYS
NDSADMTYKVKDRINQKVECNLLVVTGNNLILCQERRLQCLSFDGIKEREWQVDSVIRYI
KIAGGVSGHEGLLVGLKNGQILKIFVDNQFPIPLIKQQTGVRCLDISCSHKKLAVVDDNN
TILVYQIDTKELLFQEANGNSVAWNTHNDDMLCFSGGGMLNIKAGNFPLHQQKVPGFVVG
FCGSRIYCLHVYTMTSIEVPQSTPMYQFLEKKLFLDAYKIACLGVTDGDWRTLAMSALES
LELEVAKLSFIRIRDMKFLELINTIEARKKRGENDNNTFLGDIYAYQGKFQEAAKLYKRA
GKEEKALEMFSDLRQFEQAKEFLGSSDQNNFKQLIKKQAEWCRTTNDPKAAADMFIAAGE
FMKAIDILGENGWFEKLLELARNLNKADVEPLTACAQHLANMKKYNYAAEVYLKMGDKKK
LVQLYVQSHQWDEVFHLVEKHVEFKDDVYVPYAHWLAENDRFDEAQEAFHKAGRRTDAVK
VLEQLTLNAVIENRFNDAGYYFWQLSMQCLDIAGKKESGELKEVEDSILDKFVEYQTKAE
VYYVYHIIQRFMEEPFTSKSSEAIFNMARFLIHMLLKDTPHGVSKVHALFAIAKQGKLLG
AYKLARYAYDKLQSLRVPERFQESVYLGSIAIRSKPFQDNPDLMSLCYRCSATNPLLNNK
GNQCINCFQPFIHSFSSFEILPLVEFVIEEDISDEEAIKLISMDKLKIKKQRKQRKQESI
NSKFQSLRLDDNQDSEDDEDDGDDPFATKLMSFEQGGGDFFPVCVGRAVLKKLQRTEVFV
RKWARPLKYQYFRNILPDIRITMCKSCYKFFHSEDFELLMLQNGHCAFCRAKQDVA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgagagctattccaacttgggttgataaagttcatgataaagatgaaacacctgttagt
ttacatgacttagcttttagtcctgatggatctcaattaattgcagcagcaggaaataaa
gttttggtgtatgatgcatctgatggttccctcatacgaccttgtaatggtcacaaagag
actgtttattgtgtagcttatgctaaaagtggtaagcattttgcttcaggtggagcagat
aaaacagtaatcatatggacaaacaagttagaaggaattcttaaatatactcacaatagt
gtgattcaagctttgcagtataatccaatcacgcatcagcttgcaagttgctccatggat
gattttggattatggtctacggagcaaaaatcagtgcagaaatacaagttaccctgcagg
tctttatgttgcagttggacaaatgatggacaatatctggcaattggtcttacaaatggc
tttgttactatttggaataagtctggcgaagagaaagtaagaatcgagcgacctggaggt
tttccaatctggactttgtcttggaatccttcaaaagatgagtctgatatacttgcagtg
ggggattggggacaaaggttatcattctatcagttaagtggaaaacagattggaaaagat
tactctcttggatttgatccatgctgtcttagttattttcctaaaggggaatttcttatt
gtttctggttcagataaaaaatgttatctttatacaaaagaaggaacaagattagcaatt
attggagaacatgaaggttgggtttggtcatgtaaaataggaccagaaggaaactatgtg
gcatgtggaagtgaggatggaaccgtagcatattatcaattgatttttagcacagtacat
ggtttatataaagacagatatgcttatagagataatatgacagatgtcattgtgcaccat
ttgaccacagaacaaaaagttcgaattaaatgtagggaacttgtgaagaaaattgcgatt
tacaaacatagactagcagtacagatgcctgaaaagattgttatttatgaaatctattca
aatgacagtgcagatatgacttacaaagtcaaggatcgtattaatcaaaaggttgaatgt
aatttgttggttgtaactggaaataacttaatactttgccaggaaagacgtttgcaatgt
ttatcatttgatggtatcaaagaaagggaatggcaagtggattcagttatccgatatatc
aaaatagctggaggcgtttctggtcatgaaggtttattggttggtcttaaaaatgggcag
attctgaagatttttgtagacaatcaatttccaattccacttataaaacaacagactggt
gtgaggtgtttagatatatcttgcagtcataaaaagctggctgtcgttgatgacaacaat
accattttagtgtatcaaatagatacaaaagaacttttatttcaggaggcaaatggaaac
agtgtagcatggaacactcataatgatgatatgctatgcttttctggtggtgggatgtta
aatattaaagctggcaactttcctcttcatcagcaaaaagttccgggttttgttgttgga
ttttgtggatcacgtatttattgtctccatgtatatactatgacatcaattgaagttcca
cagtcaacaccgatgtatcagtttttggagaagaaattgtttttagatgcatacaaaata
gcttgcttgggtgtaacagatggagactggagaacattagcaatgagtgctcttgaaagc
ttagaattggaagtagccaaattgtcattcattcgaatacgagatatgaagttccttgag
ctcataaatactattgaggctaggaagaagagaggcgaaaatgacaataacacgttcctt
ggagatatctatgcatatcagggcaaattccaagaagctgcaaagctatataagcgtgct
ggtaaggaagaaaaggcacttgagatgttttcagatcttcgccagtttgagcaagccaaa
gaatttcttggtagcagtgatcaaaataattttaagcagttaattaaaaaacaagctgaa
tggtgtcgaacaaccaatgatccaaaagctgcagcggatatgttcattgcagctggagag
ttcatgaaagctattgatattcttggtgaaaatggttggtttgaaaaactattggaactt
gcaagaaacttaaataaggccgatgtggaaccacttacagcatgtgctcaacacttagca
aatatgaaaaagtacaactatgcagcagaagtttatttaaaaatgggcgacaagaaaaaa
cttgtgcagctctatgttcagtcacatcaatgggatgaggtttttcatcttgttgagaaa
catgttgagttcaaagatgatgtgtatgtaccttatgctcattggcttgcagaaaatgat
agatttgatgaagcccaagaagcttttcacaaagctggccgtcgaacagatgctgttaag
gtacttgaacaactcacattaaatgctgttattgagaataggtttaacgatgctggttat
tacttctggcaactttcaatgcaatgcttagatattgcaggaaaaaaagaatcaggtgaa
ttaaaagaggttgaggacagcattcttgataagtttgttgaataccaaacaaaggctgaa
gtatattatgtataccatattattcaaagatttatggaagaaccatttacatcaaaatca
tcagaagcaatatttaatatggcacgctttttaattcatatgttgcttaaagatactcca
catggtgtttcaaaagttcacgcactatttgctattgcaaaacaaggtaaacttttaggt
gcttacaagctagcacgctatgcatatgataaattacagtccttgcgagtaccagaacgt
tttcaggagagtgtttatcttggctctatagcaatacgatctaaaccttttcaagacaat
ccagatctaatgtcactatgttatcgatgctcagcaactaatccactattaaacaacaag
ggaaaccaatgcatcaactgttttcaaccttttattcactcctttagcagctttgagatt
cttcctttggttgagtttgtgattgaagaagacataagtgatgaagaggctataaaactt
atctctatggataaattaaaaattaagaagcaacgtaaacaacggaaacaagagtcaata
aattcaaagtttcaatcactgcgtctagacgataatcaagattctgaagatgatgaagac
gacggtgatgatccattcgctacaaaactaatgtcttttgaacagggtggcggagatttt
tttcctgtgtgtgttggacgtgctgttcttaagaaattgcagcgaacagaagtttttgtt
cgaaagtgggcgcgtcctttgaaatatcaatacttccgaaatatacttccagatatcaga
ataaccatgtgtaaatcttgttacaagttttttcattcggaagactttgagctgttaatg
ttacagaatggtcattgtgcattctgtcgagccaaacaagatgttgcctaa
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integrated database retrieval system
