Hydra vulgaris (swiftwater hydra): 100206197
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Entry
100206197 CDS
T01080
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
100206197
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hmg04040
]
100206197
Protein phosphatases and associated proteins [BR:
hmg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100206197
Ion channels [BR:
hmg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100206197
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
PKD_channel
FAS_I_H
DUF1003
Motif
Other DBs
NCBI-GeneID:
100206197
NCBI-ProteinID:
XP_012559537
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All DBs
Position
13:complement(21708720..21721461)
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AA seq
650 aa
AA seq
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MKIKESVSNISRKLTVFPSWGLEYDNLLAEAVQRNAKEAVKLLLHFTSNLSSNNFAPNKS
LTAAAQTGNLQLIELFTECGYTIADGHDVDCECEICTNDCISQSKERIKRLRAQINPVWI
FKTSTNPLVTGLNLWKTTKQLAVTDDSFEKDYTELATIMKHFCLDLLDEVNNKSEVNCIM
NCGKTKDLSKLSFINMAIEMDHKEIVAHPVPQHLLSSMVYDGIWMWKKSGFIYKMLVVLS
IAISFSITSIAYIIYPKSKLGKLLENPFVKFINTTASFIVFLGLLAVLSMSQKSGIRLGA
RPDTHQILILLWTLGFSLQEIKHMIYLGKRRYFESVWNWIDMSMMSLIIAAYIVWGSAHL
TPFSKNIYISIGDSFFAISIVLSFFHVVYLCQVIRFLGLLQLCLGRMIKVIFQFAFISCV
VLWSFSVSMVFLFHSVNRPLVNDTVPIKSGSNSTNLANIVKGGYDGLAAAMVTLAWASIN
LVGLDSLRGFDDGTMILLSSYLLFTFYHCVSMIVLLNMLIAMMSKSYQQIEDNIEVEHKY
ARTNLWLEYIGKNNNLPAPFNLIPTIASIKTVTCWIQLMILEVKRNKGLQRTKQDKTLMK
EFNELCKNLLVRYLRKKNLLEQPDVVDIEKENDFLLYVINKIELWSKLEI
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaagagagtgttagcaatatttcaagaaaattgacagtatttccttcatgg
ggactggaatatgacaacctgcttgccgaagcggtacaacgtaatgcaaaagaagctgtt
aaactacttcttcattttacatcaaatttatcttctaacaattttgcaccaaataaaagt
ttgacagcagcagcccaaactggaaatttgcaacttattgagttatttactgaatgtggg
tacacaattgctgatggacacgatgtcgattgtgaatgtgagatatgcacaaatgattgc
atcagtcaatcaaaggaaagaataaaaagattacgtgctcaaataaaccctgtttggatt
tttaaaacatcaacaaacccacttgtaactgggttaaatttatggaaaacaacaaagcaa
ttggcagttacagacgacagctttgaaaaagattatactgaactggccacaattatgaaa
catttttgtctagatttattagatgaagttaataacaaatctgaagtaaactgcattatg
aattgcggcaaaacaaaagatttatcaaagttaagcttcataaatatggctatagagatg
gatcacaaagagattgtagctcatccagttcctcaacatttgttatcttcaatggtttac
gatggaatttggatgtggaaaaaaagtggttttatatataaaatgttggtggtgctctcc
atagcaatttcattttccatcacttctatagcttacataatatatccaaaatcaaaattg
ggcaagctgttagaaaatccatttgttaaatttattaacactactgcttcgtttattgtg
tttttagggcttttagcagtattatcaatgtcacaaaaatcgggaattagattaggagca
agacctgacacacatcaaattctaattttgttatggacattagggttctcgctacaagag
atcaaacacatgatatatttggggaaacgtaggtatttcgaaagcgtttggaactggatt
gatatgagcatgatgtcattaatcatagcagcctatattgtgtggggaagtgctcacttg
acgccgttttcaaaaaacatatatattagtattggggacagcttctttgctatttccatt
gtgttgagctttttccatgttgtttacctatgtcaagttataagatttttggggttgctt
cagctatgtcttggaagaatgataaaggttatattccagtttgcattcataagttgcgtg
gttttatggtctttctccgtgagtatggtttttttatttcattcagtaaatcgaccattg
gtgaatgacacagttccaattaagtctggaagcaatagtactaacttagcaaatattgta
aaaggagggtatgacggtttagctgctgcgatggttactttagcttgggcaagtatcaat
ttagttggtttagactccttaagaggttttgatgacggaacaatgattcttttatcaagt
tatcttttgtttacattttatcattgtgtttcaatgattgtgctgcttaacatgttgatt
gcaatgatgagcaaatcatatcagcaaatcgaggacaatattgaagttgagcataagtat
gcaagaaccaacttatggttagaatatattggtaaaaacaataatcttccagctccgttt
aatttaataccgaccattgcatccatcaaaacagttacatgctggatccagcttatgata
cttgaagtaaaaagaaataagggattgcaaaggacaaaacaagacaagactttaatgaaa
gagtttaatgagctgtgcaaaaacttattagtaaggtatttgagaaaaaaaaatctactc
gaacaacctgatgttgtcgatattgaaaaagaaaatgattttttactatatgttataaat
aaaatagaactttggtcgaaattagaaatatag
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