Hydra vulgaris (swiftwater hydra): 100212302 Help Entry 100212302         CDS       T01080                                  Name (RefSeq) DNA ligase 4   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism hmg  Hydra vulgaris (swiftwater hydra) Pathway hmg03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:hmg00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     100212302  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:hmg03400]     100212302 Enzymes [BR:hmg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      100212302 DNA repair and recombination proteins [BR:hmg03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      100212302 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT_2 BRCT RNA_ligase DNA_ligase_IV LIG3_BRCT mRNA_cap_enzyme DUF2950 Motif Other DBs NCBI-GeneID:  100212302 NCBI-ProteinID:  XP_002166379 UniProt:  T2MFF1 LinkDB All DBs Position 8:11248995..11317095 Genome browser AA seq 891 aa AA seqDB search MSIQTVDSQVSFNDFVKVVEKISNTASKEKKQDIFKKFFSRWREKHKQLHGEEKTSDSLY PVIRIILPHLDKDRSYGLKEIFLAKYYIEVLNISKKSTDGINLLRYKTPKLGKQGAGDFA SVVYAALKNRCPDKGRFTIADVNECLDIIASANSEKRRDLVKNEIKKMIQNCCALEQKWI IRILLKEIRLGMSENTILPLFHPDALELYNISNSLHKVCLDLHDQNITLNKKNIMLMSPF RPMLGMRSTIDNIVKVLKHSEFFIETKIDGERIQLHKNGEQYAYFSRNAYDYSEIFGCTK YSGTLTQYINMLFKTDIKTCILDGEMVVYCVETNSFMLKGSNVDVKAQLPSGLQPCFVVF DVLMINDIELANISLKDRISKLVSIFDVMPGRIEVVDRKIGRNKEDIINAVNNAIDKCEE GIVVKDPLSLYVPNKRNGSGWYKLKPEYIDSLSDDLDLIIIGGQYGSGHRGGIISHFLLG VAVKTEEGSDTKPSYFKTFAAVGSGYTDKELSSLCSKLDKYWQKFDLKRLPSMIEFTSGC KEKPDVWIEPDKSVIVQVKAAEIIVTDKYAFGYTLRFPRLERFRYDKSWYDCMTTEDIID LQKAACGKLTSKHIESESSTTSNKKKRRLDDHVDFPVAIGKQFKAADVSNINESSSAFKG KEFCVINGSLTCTKQQLEEKIAEMSGVFVQNPGEDTYCVIADKVNVRVKHIIGSGKCDVV KVTWLLECYEKKALLPFCPKYMHYSTTKTLALLEVDFDKFGDHYLEDINPSTLSDIFSHM NADNLNAENIAELDERYTISSVGLFRRHKLYLASKLHSFVSLEFRFYGGTLCNQLNVASH VLVDESDPETLVNIRQLIRNLKKKPHVVTASWIRDCIDFKRLIAEGPYEPK NT seq 2676 nt NT seq  +upstreamnt  +downstreamnt atgtctattcaaacagttgattcacaggtatctttcaatgattttgtaaaggttgttgaa aaaatcagcaatacagcaagcaaagagaagaagcaggatatctttaaaaagtttttttca agatggagagagaagcacaagcagttacacggtgaagaaaaaacatcagactcactctat cctgtcatcagaattattttgcctcatcttgataaagatcgatcatacggattaaaagag atttttctggcaaagtactacattgaagtcttgaatatatctaaaaaaagcacagatggc attaatcttttaagatataaaacaccaaagttaggaaaacagggagctggagattttgca agtgtagtatatgcagctttaaagaaccgatgtcctgataaaggaagatttactattgca gatgtcaatgaatgtttagatataattgcaagtgcaaattctgaaaagagaagagattta gtgaagaatgagattaaaaaaatgattcaaaactgctgtgctttggaacagaagtggata attaggattttacttaaggaaataagactaggaatgagtgaaaatacaatactcccatta tttcatccagatgctttagaactctacaatatctctaacagtctccataaggtatgtttg gatttacatgatcagaacatcacacttaataaaaaaaatatcatgttaatgtcaccattt cgtcccatgttgggcatgcgttctacaattgacaatattgtaaaagtcttaaagcacagt gagttttttattgaaacaaaaattgatggtgaacgcattcagttgcataaaaatggtgaa cagtatgcttacttcagcagaaatgcatatgattattcagaaatatttggttgtacaaaa tatagtggaacgcttacccaatacatcaacatgctttttaaaactgatattaaaacatgc atattggatggagaaatggttgtttattgtgtggaaacgaatagttttatgttaaaagga tctaatgttgatgttaaagcacaactgccaagtggtttacaaccttgttttgttgttttt gatgttttgatgattaacgacattgagctggctaacatttcattaaaagatcgcataagc aagttagtttcaatttttgatgtaatgccaggtagaattgaagttgttgatagaaagatt ggccgaaataaggaagatatcattaatgctgttaataatgctattgacaagtgtgaagaa gggattgttgttaaagatcctttatctttatatgttccaaacaaaagaaatggtagtggt tggtacaaattaaagccagaatatattgatagtttaagtgatgacttagatttgatcata attggagggcagtacggctcaggacatagagggggaataatctcacattttcttcttggt gttgctgttaaaacagaagaagggtctgacacaaaaccaagttatttcaaaacatttgca gcggttggctctggttacactgataaagagttaagctctttgtgtagcaaacttgacaag tattggcaaaagtttgatttgaaaagattgccaagtatgattgaatttacaagtggttgt aaggaaaaacctgatgtttggattgagccagataaatcagttattgttcaagtgaaagct gcagaaattattgttacagacaaatatgcttttggttatacactaaggtttccacgctta gaacggtttcgctatgataagagttggtatgactgtatgacaacagaagatattattgac ttacaaaaggctgcctgtgggaaattaacatctaaacacattgaaagtgaatcatctact acatctaataaaaagaagcgaagacttgatgaccatgttgattttccagttgcaattgga aaacaattcaaagctgctgatgtttcaaatataaatgaatctagctcggcttttaaagga aaagaattttgtgttatcaatggttcactaacatgtacaaagcaacaacttgaagagaaa atagctgagatgagtggtgtttttgttcaaaatcctggagaagatacctattgtgtcata gcagataaagttaatgttagagtcaagcacataataggtagtggaaaatgcgatgtagta aaagtaacttggctgttagaatgttatgaaaaaaaagcgctgcttccattttgtcctaaa tatatgcactattctactactaaaaccttggctctccttgaagtagactttgataaattt ggggatcattatttggaagatataaatcctagtacactttcagacattttcagtcatatg aatgctgataatttaaatgcagaaaatattgcagaactggatgaacgctacacaattagt tctgttggtttatttagaagacacaaattgtatttagcatccaaattacattctttcgtc agtttagagtttcgtttttatggtggaactttgtgcaatcagctaaacgtcgcttcacat gtattagttgatgaaagtgatccggaaacattagttaacattcggcaacttatacgaaat ctaaagaaaaagccacatgttgttactgcaagttggataagagactgcatcgattttaag cgcctaattgcagaaggaccatatgaaccaaaataa

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