Hylobates moloch (silvery gibbon): 116458066
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Entry
116458066 CDS
T08803
Symbol
PCDH15
Name
(RefSeq) protocadherin-15 isoform X1
KO
K16500
protocadherin-15
Organism
hmh
Hylobates moloch (silvery gibbon)
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hmh03037
]
116458066 (PCDH15)
04515 Cell adhesion molecules [BR:
hmh04515
]
116458066 (PCDH15)
Cilium and associated proteins [BR:
hmh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
116458066 (PCDH15)
Cell adhesion molecules [BR:
hmh04515
]
Cadherins
Protocadherins
116458066 (PCDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116458066
NCBI-ProteinID:
XP_058292237
LinkDB
All DBs
Position
Unknown
AA seq
1948 aa
AA seq
DB search
MFRQFYLRTCLASGIILGSLFEICLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM
LIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQC
INKKVGTIIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDID
DGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNIVLRKRLNYEDKTRYFVIIQANDRAQN
LNERRTTTTTLTVDVLDGDDLGPVFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIV
TPTIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQK
FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISDSLNL
TSPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFS
ITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAVDADEGS
NGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAPPAERRHSICT
VYIEVLPPNNQSPPRFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRV
FNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVFDPY
LPRNLSVVEEEANAFVGQVKATDPDAGINGQVHYSLGNFNHLFRITSNGSIYTAVKLNRE
VRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQ
IEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFD
IYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPA
SRVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSA
TVKILVLHPGEIPRFTQEEYRPPPVSELATKGTMVGVISAAAINQSIVYSIVSGNEEDTF
GINNITGIIYVNGPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENNH
PPVFQKKFYIGGVSEDARMFTSVLRVKAADKDTGNYSVMAYRLIIPPIKEGKEGFVVETY
TGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLV
EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRA
IDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL
AFIIILCCIPAILVVLVSYRQRQAECTKTARIQAALPAAKPAAPAPAPVAAPPPPPPPPP
PPGAHLYEELGDSSILFLLYHFQQSRGNNSVSEDRKHQQVVMPFSSNTIEAHKSAHVDGS
LKSNKLKSARKFAFLSDEDDLSAHNPLYKENISQVSTNSDISLRTDFVDPFLSNLSKIQA
KSKSLRGPRGKIQRLWSQSVSLPRRLMRKVPNRPEIIDLQQWQGTRQKAENENTGICTNK
RGSSNPLLTTEEANLTEKEEIRQGETLIIKGTEQLKFPSSDSSFCFPRPHFSFSTLPTVS
RTVELKSEPNVITSPAECSLELSPSRPCILNSSLSRRETPICMLAVETERNIFENFAHPP
NISPSSACPPPPPPISPPSPPPAPAPLAPPPDSSPFSLFCPPPSPPSTFFPLSVSTSGPP
TPPLLPSFPSLPPPPPSIPCPPPPSASFLSTECVCLTGVKCPTNMMPAEKIKSSMTQLST
TTVCKTDPQREPKGILRHVKNLAELEKSVANMYSQIEKNYLRTNVSELQTMCPSEVTNME
ITSEQNKANLNNIVEGTEKQSHSQSTSL
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgacagttttatctccggacatgtttagcttcagggatcatcctgggctctctc
tttgaaatctgcttgggccagtatgatgatgattgcaaactagctaggggaggaccacca
gctaccatagttgctattgacgaagagagtcggaatggtacaattctggtggacaacatg
ctgatcaaagggactgctggaggaccagaccccaccatagaactttctttaaaggataat
gtggattactgggtgttgatggatcctgttaagcaaatgcttttcctgaacagcactggg
agagttctggatagagatccaccgatgaacatacactccattgtggtgcaggtccagtgc
atcaacaaaaaagtgggcactattatctaccatgaagtgcgaatagtggtgagagacagg
aatgacaactcacccactttcaagcatgaaagctactatgccacagtgaatgagctcact
ccagttggtaccacgatattcacaggattttcaggagacaatggagctacagatatagat
gatggaccaaatggacagatagagtatgttattcagtataatccagatgatccgacatcc
aatgacacatttgaaattcccctaatgttgactggaaatatagtgttaaggaagaggctc
aactatgaagataagactcgctactttgtcataatccaagctaatgaccgtgcccaaaat
ctgaatgagaggcgaaccaccaccaccactctcacagtggatgttctggatggagatgac
ttgggtccagtgtttcttccttgtgtccttgtgccaaacactcgtgattgccgtccactc
acttatcaagctgccatacctgagttgagaactccggaagaactgaaccccattattgtt
acgccaacaatccaagccattgatcaggaccggaatattcaaccaccatcagataggcca
ggaatcctctattccatccttgttgggactcctgaggattacccacgatttttccatatg
catcctaggacagcagaacttagtctcctggagccagtaaacagagactttcaccagaaa
tttgatttggttattaaggctgaacaagacaatggtcatcctcttcctgcctttgccagt
ctacacattgaaatactggatgaaaacaatcaaagcccgtatttcacaatgcccagttat
caaggctatatcctggaatctgccccagtgggagcaaccatttcggacagtctcaatttg
acctcacctttaagaatagtagctctggacaaggacatagaagatacaaaagacccagag
cttcacctttttctgaatgactacacctcagtcttcaccgtcacacagactggtattact
cgctacctcaccttacttcaaccagtggacagggaagaacagcaaacttacaccttttcg
ataacagcatttgatggtgtacaggaaagtgagccagtcatcgtcaatattcaagtgatg
gatgcaaatgataacacaccaaccttccctgaaatatcctatgatgtgtatgtttataca
gacatgagacctggggacagtgtcatacagctcactgcagtcgacgcagacgaagggtca
aatggggagatcacatatgaaatccttgttggggctcagggagacttcatcatcaataaa
acaacagggcttatcaccatcgctccgggggtggaaatgatagtcgggcggacttatgca
ctcacggtccaagcagcggataatgctcctcctgcagagcgaaggcactccatctgcact
gtgtacattgaagtgcttccaccaaataatcaaagccctcctcgcttcccacagctgatg
tatagccttgaaattagtgaagccatgagggttggtgctgttttattaaatctacaggca
actgatcgagagggagactcaataacatatgccattgagaatggagatcctcagagagtt
tttaatctttcagaaaccacggggattctaaccttagggaaagcactggacagggaaagc
actgatcgctacattctgatcatcacagcttcagatggcaggccagatgggacctcaact
gccacagtaaacatagtggtgacagatgtcaatgacaatgctccagtgtttgatccttat
ctgccaagaaatttatctgtggtggaggaagaagccaatgcctttgtgggtcaagtaaaa
gcaacagaccctgatgctggaataaatggtcaagtgcactacagtttgggtaactttaat
catctttttcgtatcacatccaatgggagcatttacacagcagtgaaacttaacagagaa
gtcagggactactatgaacttgttgttgtggcaacagatggagcagtacaccctcgtcat
tcaactctaaccctggccatcaaggttttggacattgatgataacagtcctgtgttcact
aattcaacatacactgtccttgttgaagagaatctgccagctgggaccaccatccttcaa
atagaggccaaagatgtcgatcttggagcaaatgtgtcttaccggataagaagcccagaa
gtgaagcacttttttgcactacatccatttacaggagaactatcccttttaaggagttta
gattatgaggcattcccagaccaagaagcaagtatcacttttctggtagaggcctttgat
atttatggaacaatgccacctggtattgctactgtcacagtgattgtaaaggatatgaat
gattatcctcctgtctttagtaaacgaatatacaaagggatggtggctccagatgcagtc
aagggtacacctatcacaacagtttatgctgaagatgcagaccctcctggattacctgca
agtcgtgtgaggtatagagtagatgatgtccagtttccttaccctgccagtatttttgat
gtggaagaagattctggaagagtaataacacgagtcaatcttaatgaagaacctacaaca
atttttaagttggtggtggttgcttttgatgatggggagcctgtgatgtccagcagtgcc
acagtgaaaattcttgtcttacatcctggtgagatcccacgcttcacacaggaggaatat
agacctcctccagtaagtgaacttgccaccaaagggaccatggttggtgtaatttctgct
gctgccattaatcaaagtattgtgtactccattgtttcaggaaatgaagaagatacattt
ggaattaataacatcacaggtattatctatgtgaatggacctctggattatgagaccagg
acaagctatgtacttcgagtccaagctgattccctggaagtggtccttgccaatctccga
gttccttcaaaaagcaatacagctaaagtatacattgagattcaggatgaaaataatcat
cccccagtgtttcagaaaaaattttacatcggaggtgtatctgaagatgcaagaatgttt
acttctgtactcagagtgaaggctgctgataaagatactggcaattatagtgtcatggcc
tacagactcataataccaccaattaaagagggaaaagaaggatttgtagtggaaacatat
acaggccttatcaaaactgctatgctcttccataatatgaggagatcctacttcaagttt
caagttattgcaactgatgactatgggaagggactgagtggcaaagccgatgtactcgtg
tctgtggtcaatcagctggacatgcaagtcattgtttccaatgtgcctcctactctagtg
gaaaaaaagatagaagatcttacagagatcttggatcgctatgttcaggaacaaattcct
ggtgccaaggtcgtagtggagtccattggagctcgccggcatggagatgccttttcccta
gaagattacaccaaatgtgacttgactgtctatgcaattgacccccaaaccaacagagcc
atcgaccgaaatgagctttttaaatttttagatggcaaactacttgatatcaataaagac
tttcagccgtattatggggaaggcggacgcattctggagatccggactccagaggcagtg
accagcattaaaaagagaggagaaagtctaggatacacagaaggggccttgttggctctg
gccttcatcatcatcctctgctgcattcctgccatcttggtggttttggtcagctacaga
caacgtcaagctgagtgcacaaagactgcgcgaattcaggccgcattacccgcggctaaa
ccagcagcgccggcccctgcaccagtggcagcgcccccgccgccgccgccgccgccgcct
ccgccaggtgcgcacctctatgaagaacttggagacagctcaattcttttccttctctac
cattttcaacaaagcaggggaaataactcagtctcagaagacaggaaacatcaacaagtt
gtgatgcccttttcttccaatactattgaggctcacaagtcagctcatgtagacggatca
cttaagagcaacaaactgaagtctgcaagaaaattcgcatttctatctgatgaggatgac
ttaagtgcccataatcccctttataaggaaaacataagtcaagtctcaacaaattcagac
atttcactgagaacagattttgtagacccatttttatccaatttatccaaaatacaagcc
aagagtaagtctctgaggggcccaagaggaaagattcagaggctgtggagtcagtcagtc
agcttacccaggaggctgatgaggaaagttccaaatagaccagagatcatagatctgcag
cagtggcaaggcaccaggcagaaagctgaaaatgaaaacactggaatctgtacaaacaaa
agaggtagcagcaatccattgcttacaactgaagaggcaaatttgacagagaaagaggaa
ataaggcaaggtgaaacactgattataaaaggaacagaacagttgaaatttccctcttca
gactcttcattttgctttcccaggcctcacttctcattctccactttgccaactgtttca
agaactgtggaactcaaatcagaacctaatgtcatcacttctcctgctgagtgttccttg
gaactttctccttcaaggccttgtattttaaattcttcactctctaggagagagacacct
atttgtatgttagctgttgaaactgaaagaaatatttttgaaaattttgcccatccacca
aacatctctccttcttctgcctgtccccctcctcctcctcctatttctcctccttctcct
cctcctgctcctgctcctcttgctcctcctcctgacagttctcctttttctcttttttgt
cctcctccctctcctccttctacattttttccactttccgtttcaacttctggtccccca
actccaccacttctaccttcatttccaagtcttcctccaccacctccttctattccttgc
cccccacctccttcagcttcatttctgtccacagagtgtgtctgtctaacaggtgttaaa
tgcccgaccaacatgatgcctgccgagaaaattaagtcctctatgacacagctatcaaca
acaacagtgtgtaaaacagaccctcagagagaaccaaaaggcatcctcagacatgttaaa
aacttagcagaacttgaaaaatcagtagctaacatgtacagtcaaatagaaaaaaactat
ctacgcacaaatgtttcagaacttcaaactatgtgcccttcagaagtaacaaatatggaa
atcacatctgaacaaaacaaggcgaatttgaacaatattgtcgagggaactgaaaaacaa
tctcacagtcaatctacttcactgtaa
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integrated database retrieval system
