Hylobates moloch (silvery gibbon): 116467554
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Entry
116467554 CDS
T08803
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116467554 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmh03400
]
116467554 (LIG4)
Enzymes [BR:
hmh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
116467554 (LIG4)
DNA repair and recombination proteins [BR:
hmh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
116467554 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
RTT107_BRCT_5
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
116467554
NCBI-ProteinID:
XP_032007194
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MATPQESIKISFYRWDSLVHRGSGACPRPDLCSTLERIQRSKGRAEKIRHFREFLDSWRK
FHDALHKNQKIVTDSFYPAMRLILPQLERERMAYGIKETMLAKFYIELLNLPRDGKDALK
LLNYRTPTGTHGDAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLIK
KSLLQLISQSSALEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQL
HDPSVGLSDISITLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVY
KYFSRNGYNYTDQFGASPAEGSLTPFIHNAFKTDIQICILDGEMMAYNPNTQTFMQKGTK
FDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQA
HTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVSGLIDELDILIVG
GYWGKGSRGGMMSHFLCAVAEKSPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKP
FHKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDK
EWHECMTLDDLEQLRRKASGKLASKHLYVGGDDEPQEKKRKAAPKMKKVIGVIEHLKAPN
LTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSKNIR
VKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVD
TDLNELKEVFSGIKNSNEQTPEEMTSLIADLEYRYSWDCCPLSMFRRHTVYLDLYAVIND
LSTKNEGTRLAVKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKI
LKESWVTDSIDKSELQEENQYLI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccgcaggaaagcatcaagatctcattttaccgctgggattctctggttcac
agaggtagtggagcttgcccgaggccagatttatgttcaactttagaacgaatacagaga
agtaaaggacgtgcagaaaaaatcagacacttcagggaatttttagattcttggagaaaa
tttcatgatgctcttcataagaaccaaaaaattgtcacagactctttttatccagcaatg
agactaattcttcctcagctagaaagagagagaatggcctatggaattaaagaaactatg
cttgctaagttttatattgagttgcttaatttacctagagatggaaaagatgccctcaaa
cttttaaactacagaacacccactggaactcatggagatgctggagactttgcaatgatt
gcatattttgtgttgaagccaagatgtttacagaaaggaagtttaaccatacagcaagta
aacgaccttttagactcaatcgccagcaataattctgctaaaagaaaagacctaataaaa
aagagccttcttcaacttataagtcagagttcagcacttgagcaaaagtggcttatacgg
atgatcataaaggatttaaagcttggtgttagtcagcaaactatcttttctgtttttcat
aatgatgctgctgagttgcataatgtcactactgatctggaaaaagtctgtaggcaactg
catgacccttctgtaggacttagtgatatttctatcactttattttctgcctttaaacca
atgctagctgctattgcagatattgagcacattgagaaggatatgaaacatcagagtttc
tacatagaaaccaagctagatggcgaacgtatgcaaatgcacaaagatggagatgtatat
aaatacttctctcgaaatggatataactatactgatcagtttggtgcttctcctgcagaa
ggttctcttaccccattcattcataatgcattcaaaacagatatacaaatctgtattctt
gatggtgagatgatggcctataatcctaatacacaaactttcatgcaaaagggaactaag
tttgatattaaaagaatggtagaggattctgatctacaaacttgttattgtgtttttgat
gtattgatggttaataataaaaagctagggcatgagactctgagaaagaggtatgagatt
ctcagtagtatttttacaccaattccaggtagaatagaaatagtgcagaaaacacaagct
catactaagaatgaggtaattgatgcattgaatgaagcaatagataaaagagaagaggga
attatgataaaacaacctctatccatctacaagccagacaaaagaggtgaagggtggtta
aaaattaaaccagagtatgtcagtggactaatagatgaattggacattttaattgttgga
ggatattggggtaaaggatcacggggtggaatgatgtctcattttttgtgtgcagtagca
gagaagtcccctcctggtgagaagccatctgtgtttcatactctctctcgtgttggctct
ggctgcaccatgaaagaactgtatgatctgggtttgaaattggccaagtattggaagcct
tttcataaaaaagctccaccaagtagcattttatgtggaacagagaagccagaagtgtac
attgaaccttgtaattctgtcattgttcagattaaggcagcagagatcgtacccagtgat
atgtataaaactggctgcaccttgcgttttccacgaattgaaaagataagagatgacaaa
gagtggcatgagtgcatgaccctggacgacctagaacaacttaggaggaaagcatctgga
aagctcgcatctaaacacctttatgtaggtggtgatgatgaaccacaagaaaaaaagcgg
aaagctgccccaaagatgaagaaagttattggagttattgagcacttaaaagcacctaac
cttactaacgttaacaaaatttctaatatatttgaagatgtagagttttgtgttatgagt
ggaacagatagccagccaaagcctgacctggagaacagaattgcagaatttggtggttat
atagtacaaaatccaggcccagacacgtactgtgtaatcgcagggtctaagaacatcaga
gtgaaaaacataattttgtcaaataaacatgatgttgtcaagcctgcatggcttttagaa
tgttttaagaccaaaagctttgtgccatggcagcctcgctttatgattcatatgtgccca
tcaaccaaagaacattttgcccgtgaatatgattgctatggtgatagttatttcgttgat
acagacttgaacgaactgaaggaagtattctcaggaattaaaaattctaatgagcagact
cctgaagaaatgacttctctgattgctgatttagaatatcggtattcctgggattgctgt
cctctcagtatgtttcgacgccacaccgtttatttggacttgtatgctgttattaatgac
ctgagtaccaaaaatgaggggacaaggttagctgttaaagccttggagcttcggtttcat
ggagcaaaagtagtttcttgtttagctgagggagtgtctcatgtaatcattggggaagat
catagtcgtgttgcagattttaaagcttttagaagaacgtttaagagaaagtttaaaatc
ctaaaagaaagttgggtcactgattcaatagacaagagtgaattacaagaagaaaaccag
tatttgatttaa
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