Hylobates moloch (silvery gibbon): 116475391
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Entry
116475391 CDS
T08803
Symbol
RIGI
Name
(RefSeq) LOW QUALITY PROTEIN: antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh04064
NF-kappa B signaling pathway
hmh04622
RIG-I-like receptor signaling pathway
hmh04623
Cytosolic DNA-sensing pathway
hmh05160
Hepatitis C
hmh05161
Hepatitis B
hmh05162
Measles
hmh05164
Influenza A
hmh05168
Herpes simplex virus 1 infection
hmh05169
Epstein-Barr virus infection
hmh05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
116475391 (RIGI)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116475391 (RIGI)
04623 Cytosolic DNA-sensing pathway
116475391 (RIGI)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
116475391 (RIGI)
05160 Hepatitis C
116475391 (RIGI)
05171 Coronavirus disease - COVID-19
116475391 (RIGI)
05164 Influenza A
116475391 (RIGI)
05162 Measles
116475391 (RIGI)
05168 Herpes simplex virus 1 infection
116475391 (RIGI)
05169 Epstein-Barr virus infection
116475391 (RIGI)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hmh04054
]
116475391 (RIGI)
Enzymes [BR:
hmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116475391 (RIGI)
Pattern recognition receptors [BR:
hmh04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
116475391 (RIGI)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
Helicase_C
DEAD
ResIII
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
116475391
NCBI-ProteinID:
XP_058301890
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MPFFAWRDAFHLCGSLFTSWLVIWNFYHFPGIEFTGISGATAENVPVEQIVENNDIIILA
PQILVNNLKKGTIPSLSIFTLVIFDECHNPTKQHPYNMIMFNYLDQKLGGSSGPLPQVIG
LTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESWI
SDKFKCSIAQLMRDTESLAKRICKDLSEINQIQNREFGTQKYEQWIVTVQKACMVFQMPD
KDEESRICNALFLYTSHLRKYNDAVIINEHARMKDALDYLKDFFSNVQAAGFDEIEQDLT
QRFDXKLQELESVSRDPSKENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWI
EGNPKLSFLKPGILTGCGKTNQNTGMTLPAQKCILDAFKANGDHNILIAISVADEGIDIA
QCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEXINMYKEKMMNDSILR
LXTWDEAVFREKILHIQTHEKFISDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIE
ECHYTVLGDAFKECLVSRPHPKPKQFSSFEKRAKIFCAXQNCSHDWGIHVKYKTFEIPVI
KIESFVVEDIATGIQTLYSKWKDXFEKIPFDPAEMSK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcctttctttgcctggcgtgatgcatttcatctttgtggttccttattcacatcgtgg
ttagtaatatggaatttctatcatttcccaggtatagagtttacaggcatttctggagca
acagctgagaatgtcccagtggaacagattgttgagaacaatgacatcatcattttagcg
ccacagattcttgtgaacaaccttaaaaagggaacaattccatcactgtccatctttact
ttagtgatatttgatgaatgccacaaccctactaaacagcacccatacaatatgatcatg
tttaattatctagatcagaaacttggaggatcttcaggcccactgccccaggtcattggg
ctgactgcctcggttggtgtcggggatgccaaaaacacagatgaagcattggattatatc
tgcaagctgtgtgcttctcttgatgcgtcagtgatagcaacagtcaaacacaatctggag
gaactggagcaagttgtttataagccccagaagtttttcaggaaagtggaatcatggatt
agtgacaaatttaaatgcagcatagctcagctgatgagggacacagagagtctggcaaag
agaatctgcaaagacctcagtgagataaatcaaattcaaaacagggaatttggaacacag
aaatatgaacaatggattgttacagttcagaaagcatgcatggtgttccagatgccagac
aaagatgaagagagcaggatttgtaacgccctgtttttatacacttcacatttgcggaaa
tataatgatgccgtcattatcaatgagcatgcacgaatgaaagatgctttggattacttg
aaagacttcttcagcaatgtccaagcagcaggattcgatgagattgagcaagaccttact
cagagatttgactaaaagctacaggaactagaaagtgtttccagggatcccagcaaggag
aaccctaaacttgaagacctctgcttcatcttacaagaagagtaccacttaaacccagag
acaataacaattctctttgtgaaaaccagagcacttgtggatgctttaaaaaattggatt
gaaggaaatcctaaactcagttttctaaaacctggcatattgaccggatgtggcaaaaca
aatcagaacacaggaatgaccctcccggcacagaagtgtatattggatgcattcaaagcc
aatggagatcacaatattctgattgccatctcagttgctgatgaaggcattgacattgca
cagtgcaatcttgtcatcctgtatgagtacgtgggcaatgtcatcaaaatgatccaaacc
aggggcagaggaagagcaagaggtagcaagtgcttccttctgactagtaatgctggtgta
attgaaaaagaataaataaacatgtacaaagaaaaaatgatgaatgactctattttacgc
ctttagacatgggacgaagcagtatttagggaaaagattctgcatatacagactcatgaa
aaattcatcagtgatagtcaagaaaaaccaaaacctgtacctgataaggaaaataaaaaa
ctgctctgcagaaagtgcaaagccttggcatgttacacagctgacgtaagagtgatagag
gaatgccattacactgtgcttggagatgcttttaaggaatgccttgtgagtagaccacat
cccaagccaaagcagttttcaagttttgaaaaaagagcaaagatattctgtgcctgacag
aactgcagccatgactggggaatccatgtgaagtacaagacatttgaaattccagttata
aaaattgaaagttttgtggtggaggatattgcaactggaattcagacactgtactcgaag
tggaaggacnnttttgagaagataccatttgatccagcagaaatgtccaaatga
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integrated database retrieval system
