Hydrocarboniclastica marina: soil367_03870
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Entry
soil367_03870 CDS
T06192
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi00300
Lysine biosynthesis
hmi00550
Peptidoglycan biosynthesis
hmi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
soil367_03870
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
soil367_03870
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmi01011
]
soil367_03870
Enzymes [BR:
hmi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
soil367_03870
Peptidoglycan biosynthesis and degradation proteins [BR:
hmi01011
]
Precursor biosynthesis
Amino acid ligase
soil367_03870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
AAA_30
LEA_5
Motif
Other DBs
NCBI-ProteinID:
QCF25133
UniProt:
A0A4P7XEZ2
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All DBs
Position
845836..847332
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AA seq
498 aa
AA seq
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MCVKPLSTLLAGFAEVPSVLNLAVHGLSADSRQLRAGDAFVALKGSAGDPWRYVAAAIER
GAVAVLLETDGETGCSEQGSALVVKVPQLTQHQAALADRFFDAPSQALHVIGVTGTNGKS
SVTRYIAEILNSGGLKTATLGTLGYGFSDSLAEASHTTPDVISVHRWLHVFKQQGASAVV
MEVSSHALDQGRVAKVHFEGAVYTNLSRDHLDYHGTMEEYGAAKASLFTNTHLRFAIINA
DDQFGRELSEKVSQGCQVWRYTASADASAELRLRQLNLRQDGFDAVLETPSQTLPLSSNL
LGQFNACNITAAVGAALALNIEPAVVAAAVKNISAPAGRLQRFSAEDGLRVVVDYAHSPA
ALETALNALAAHVKGNLWCVFGCGGDRDSGKRPLMGEIAERLANAVVLTDDNPRSEDPET
IVQGILGGMSEQANVHIEHDRAAAIEYAVRQAGPEDLILVAGKGHETYQERDGQKRDFSD
ILTVQELINRRTARGILA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgaagcccctgagcactctactagccggttttgccgaggtgccttcggtcctg
aatctggccgtgcacgggctatcggcagatagccgtcagctgcgcgccggagacgccttt
gttgcgctcaagggctcggccggagacccctggcgctacgttgccgcggcgatcgaacgc
ggggccgtagctgttttactcgagaccgacggcgagacaggttgttctgaacaaggcagc
gccctggtcgttaaagtgccccagcttacccagcaccaggctgctttggccgatcgtttt
ttcgacgccccttctcaggcgttgcatgttattggcgtcaccggcaccaatggcaagagt
tcggtgacgcgctacatcgcagaaattcttaacagcggtggcctgaaaactgcgacgttg
ggaacgctggggtacggcttcagcgacagcctcgcagaagccagccacaccaccccagac
gtgatctccgtacatcgctggttgcatgtcttcaagcagcagggcgcaagtgcagtggtc
atggaggtttcgtcccatgccctggaccagggccgggtggcaaaggtccactttgaaggc
gcggtctacaccaacctgagtcgcgaccatcttgactatcacgggaccatggaagagtac
ggcgcagccaaggccagcctgttcaccaatacccacctgcgtttcgccattatcaatgcc
gacgatcagtttggccgcgaactgagcgagaaggtatcccagggttgtcaggtctggcgc
tataccgcttccgctgacgcttcggcagaactcaggcttcgccaactcaacctgcgccag
gacggattcgatgcggtgcttgagacgccttcacagacgctgccgttgtcgagcaatctg
ctggggcaattcaatgcctgcaatatcactgcagcggtgggggctgcccttgcgttgaat
atcgaaccggccgtagtcgctgctgcagtgaagaacatttcagccccggcagggcgctta
cagcgcttcagtgccgaagacggcctgcgagtggttgttgactacgcgcactcgccggct
gccctggaaacagcgctgaatgcacttgcagcacacgtaaaaggcaacctctggtgtgtt
tttggttgtggcggcgaccgcgattcgggcaagcggccgcttatgggagaaattgctgag
cgactggcgaatgcggtggtgcttaccgatgacaaccctcgtagcgaagaccctgagaca
attgtccagggcattcttggtgggatgagcgagcaggctaatgtccacattgagcacgac
cgcgctgcagcgattgagtatgcggtgcgccaggccggcccagaagacctaatcctcgta
gcaggcaaggggcacgaaacgtaccaggagcgcgacggacaaaaacgcgatttcagtgac
atcctgacggtccaggaactgattaaccgtcggaccgcgcgagggatattggcatga
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