KEGG   Hydrocarboniclastica marina: soil367_17140
Entry
soil367_17140     CDS       T06192                                 
Symbol
cas5e
Name
(GenBank) type I-E CRISPR-associated protein Cas5/CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
hmi  Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:hmi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hmi02048]
    soil367_17140 (cas5e)
Prokaryotic defense system [BR:hmi02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    soil367_17140 (cas5e)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: QCF27512
UniProt: A0A4P7XM29
LinkDB
Position
complement(3854032..3854757)
AA seq 241 aa
MDYLIFQLYGPLASWGTPAVGEARPTSDHPGRSALIGIVAAALGIRRDDAAAQQSLAEAV
VFGVKQITPGSFIRDFHTVQVPKRNRNRQYLTRKEEMGFSSDRLNTIISRREYRCDGLWY
VAVSLSSQSDWSLEDIAEALRCPVFTPYLGRKSCPLAAPLAPRIVQNTGGLAEAFSEGFP
DFFPGQARYLGTGEMVDYFWEGEAADVAVQDTRFPEDDVVSRDRWQFRGRAEYHARIKEA
V
NT seq 726 nt   +upstreamnt  +downstreamnt
atggactaccttatttttcagctttacggccccctggcgagttggggcacgcccgcggtc
ggtgaagcgcgaccaacctcagaccacccgggccgctcggcgttgatcggaatagtcgcg
gcggcgttgggcattcgtcgggacgatgctgcggcccagcagtccctggctgaggctgtg
gtttttggagttaagcagatcactcctggctcgttcattcgcgattttcacacagttcag
gttcccaagcgcaaccgcaacaggcagtacttgacgcgaaaggaagagatggggttctcg
agcgaccgcctgaacaccatcatctccagacgagaataccgatgtgatggcctgtggtat
gtggccgtatcgttgtcttcccagagcgattggtcccttgaggacatcgcggaagcgcta
cggtgcccggtttttacgccctatctggggcgaaagtcctgtccgctggctgctccttta
gcaccgagaattgtccagaacacggggggcttagccgaagcattttctgagggctttccg
gacttttttccgggccaggcgcgctacttgggaactggcgaaatggttgactacttttgg
gaaggggaggcggctgatgttgccgttcaggacacgcgcttcccggaagacgatgtggtt
agccgggatcgctggcaattcagaggtcgggccgagtatcacgctcgaatcaaggaggcc
gtgtaa

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