Haematobacter massiliensis: HmaOT1_08710
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Entry
HmaOT1_08710 CDS
T05861
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hml
Haematobacter massiliensis
Pathway
hml03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HmaOT1_08710 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hml03400
]
HmaOT1_08710 (nth)
Enzymes [BR:
hml01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HmaOT1_08710 (nth)
DNA repair and recombination proteins [BR:
hml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HmaOT1_08710 (nth)
Prokaryotic type
HmaOT1_08710 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QBJ24329
LinkDB
All DBs
Position
complement(1438023..1438700)
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AA seq
225 aa
AA seq
DB search
MVRQLDYSDMKEVFRRFEEREPEPVGELNYTNAFTLLVAVALSAQATDVGVNKATKGLFE
VADTPAKMLALGEEGIISHIRTIGLYRNKARNVLKLSALLQERFGGEVPSSRAALETLPG
VGRKTANVVLNTWFGFPAQAVDTHIFRVGNRSGIAVGRNVEVVERAIEDNVPVEFQRHAH
HWLILHGRYTCKARAPLCPVCLIRDICLYDEKTVAGGKTSARIDP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggtcagacagctcgactacagtgacatgaaggaggtcttccgccggtttgaggaacgg
gagcctgagcctgtgggagagttgaactacaccaacgccttcacgttgctggtggcggta
gcgctttcagcgcaggcgacggatgtcggcgtcaacaaggccacgaagggcctgttcgaa
gtcgccgatacacccgcgaagatgctggctctgggcgaggagggcatcatctctcacatc
cgcaccatcgggctttaccgtaacaaggccaggaacgtgctgaaactctccgctttgctg
caggagcgtttcgggggagaggtgccgtcgtcccgcgccgcactggagacattgccgggc
gtaggacggaagacggcaaacgtggtgttgaatacctggttcggctttccggcgcaggcg
gtggacacgcatatcttccgcgtcggcaaccggagtggcattgccgtcggccgcaatgtg
gaggtggtggagcgggcgatcgaggacaacgttccggtcgagttccagcgtcatgcccac
cactggctgatcctgcacggtcgctatacctgcaaggcgcgtgcgcccctttgtcctgtc
tgcctgatccgggacatctgcctttatgacgaaaagacggttgcgggtggcaagacctcg
gctcggattgatccttga
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