Heliomicrobium modesticaldum: HM1_2794
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Entry
HM1_2794 CDS
T00653
Symbol
nth
Name
(GenBank) endonuclease iii
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hmo
Heliomicrobium modesticaldum
Pathway
hmo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HM1_2794 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmo03400
]
HM1_2794 (nth)
Enzymes [BR:
hmo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HM1_2794 (nth)
DNA repair and recombination proteins [BR:
hmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HM1_2794 (nth)
Prokaryotic type
HM1_2794 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ABZ85323
UniProt:
B0TCD5
LinkDB
All DBs
Position
complement(2765673..2766284)
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AA seq
203 aa
AA seq
DB search
MYPDARCALNFRNPFELLIATMLAAQATDKSVNRVTPALFAKAPTPEAMLLLTQEELEDL
IKSIGLYRNKGRNILAACRILVEKHGGQVPGYREGLEKLPGVGRKTANVVLAEAFQEPAI
AVDTHVFRVSNRLGLAQAKDVVKTEQDLMNNIPRDLWAKAHHWLIFHGRQVCHARKPACG
VCRLAECCREYTGLKRETGEETE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtatcccgacgcccgttgcgccctcaatttccgcaacccctttgaattgctgatcgcc
accatgctggccgcccaagcgacggacaagtccgtcaaccgtgtcacccctgccctattc
gccaaagcgcctacgccggaggcgatgctcctgctgacgcaggaagaactggaggacctg
atcaagagcatcggcctttaccggaacaagggccgcaacatcctggcggcctgtcgcatc
ttggtggaaaaacatggcggacaggtccccggctatcgggagggattggaaaaactccct
ggggtgggcaggaagacggccaatgtggtgctggccgaagcttttcaggagccggccatc
gccgtggacacccatgtcttccgcgtctccaatcgtctcggactggcgcaagccaaagac
gtggtcaaaacggaacaagatctgatgaacaacattccccgggacctttgggccaaggcc
caccactggctgatctttcacggacgtcaggtttgtcatgcccgcaaaccggcttgcggg
gtctgccggttggctgaatgctgccgagaatatacaggtttgaaacgagagacaggggag
gagactgaatga
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