Helicobacter mastomyrinus: V3I05_00240
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Entry
V3I05_00240 CDS
T11030
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy00300
Lysine biosynthesis
hmy00550
Peptidoglycan biosynthesis
hmy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V3I05_00240
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V3I05_00240
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmy01011
]
V3I05_00240
Enzymes [BR:
hmy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
V3I05_00240
Peptidoglycan biosynthesis and degradation proteins [BR:
hmy01011
]
Precursor biosynthesis
Amino acid ligase
V3I05_00240
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
CbiA
Motif
Other DBs
NCBI-ProteinID:
XAM18159
UniProt:
A0ABZ3F6X0
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All DBs
Position
44571..45980
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AA seq
469 aa
AA seq
DB search
MIIIKTIKHSDKLYTAITDDTRVVASLLKGESISQDEHPIELDSLLLVRCKQNATFVERL
QDSIKDTSSRQIHIIESTQLIKILLGNAMQEQMRIVGITGTNGKTTTAAIIYSILLDLGY
KVALLGTRGFFMNDKMIKPKGLTTPSLLELYENLCIAREAKSDFFIMEVSSHAIEQERIA
GLEFALKILSNITSDHLDYHKSIEEYRRIKNSFFEGSGAKLINADEPYAHCSDKKAFYYG
IEKKGHLSVDAYALENGIDAHISWRGHNGDVEHSTIEAHLYGKHNLYNALAAVGAVKILT
SKGLESIAQALGHFGGVGGRMEVVHTSPLVIVDFAHTYDGMRQIFESFRHQKIVVVFGAG
GDRDKTKRPKMGECAQQFAHKIYVTSDNPRTESAQSIIEDILSGIIRQERVFVEVERKNA
ICRALDELQNDEVLLILGKGDEDYQIIGTQKLHFDDREIVKAYFAHKHS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgataatcataaaaaccataaaacatagcgataagctttatactgctatcactgatgat
actcgcgttgtcgcctctcttttgaaaggagagagcataagccaagatgagcaccccata
gagttagattccctcctgcttgtgagatgtaagcaaaatgccacttttgtagaacgctta
caagattctataaaagatacatcatctaggcagattcatattatagaatctacccagctt
ataaaaatacttctaggcaacgcaatgcaggagcaaatgcgcatagtggggattactggc
acaaatggtaagacaaccacagcggcgattatttattccatactgcttgatttgggatat
aaagtagccttgcttggcacaaggggcttttttatgaatgataaaatgataaagcctaag
gggctaacaacgccgagtttgcttgagctttatgaaaatctatgtattgcacgagaggca
aaaagtgattttttcattatggaggtaagctctcacgctatcgagcaagaacgtatcgca
gggcttgagtttgctttgaagattcttagtaatattacaagcgatcatttagattatcat
aaaagtatagaggaatatagacgtatcaaaaatagcttttttgagggcagtggggcaaag
cttatcaacgcagatgagccatacgcacattgcagtgataaaaaagcattttattatggg
attgagaaaaaagggcatttgagtgtagatgcctacgcgctggaaaatggcattgacgca
catatctcgtggcgaggacacaatggcgatgtggagcatagcacgatagaagcacatttg
tatggaaagcataatctttataatgcccttgctgctgttggagcggtgaagattctcaca
tctaaaggcttagaatctatcgcgcaagctttggggcattttggcggtgtgggcggacgt
atggaggtcgtgcatacatcgccgcttgtgatagtggattttgctcatacatacgacggt
atgcgtcaaatttttgaaagctttagacatcaaaaaattgtagtggtatttggcgcagga
ggtgatagagataaaactaagcgtcctaaaatgggagagtgcgcccagcagttcgcacat
aagatatatgttacaagtgataatcctcgaacagaatctgcacaatctattatagaggat
atattgagcggtattattaggcaggagcgcgtatttgtagaagttgagcgcaaaaatgcg
atttgcagggcattagatgagctgcaaaatgatgaagtactactgattttagggaaaggc
gatgaggactatcaaatcatcggcacacagaagctacattttgatgatagagaaatagta
aaggcatattttgctcataaacattcatag
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