Hemiscyllium ocellatum (epaulette shark): 132815056
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Entry
132815056 CDS
T09720
Name
(RefSeq) actin, cytoplasmic type 5-like isoform X1
KO
K05692
actin beta/gamma 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03082
ATP-dependent chromatin remodeling
hoc04145
Phagosome
hoc04210
Apoptosis
hoc04510
Focal adhesion
hoc04520
Adherens junction
hoc04530
Tight junction
hoc04810
Regulation of actin cytoskeleton
hoc04814
Motor proteins
hoc04820
Cytoskeleton in muscle cells
hoc05100
Bacterial invasion of epithelial cells
hoc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132815056
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132815056
09143 Cell growth and death
04210 Apoptosis
132815056
09144 Cellular community - eukaryotes
04510 Focal adhesion
132815056
04520 Adherens junction
132815056
04530 Tight junction
132815056
09142 Cell motility
04814 Motor proteins
132815056
04820 Cytoskeleton in muscle cells
132815056
04810 Regulation of actin cytoskeleton
132815056
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132815056
05100 Bacterial invasion of epithelial cells
132815056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132815056
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132815056
03036 Chromosome and associated proteins [BR:
hoc03036
]
132815056
03029 Mitochondrial biogenesis [BR:
hoc03029
]
132815056
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hoc04812
]
132815056
04147 Exosome [BR:
hoc04147
]
132815056
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132815056
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
132815056
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
132815056
NuA4 complex
132815056
Chromatin remodeling factors
BAF complex
132815056
PBAF complex
132815056
GBAF(ncBAF) complex
132815056
SWR1 complex
132815056
Mitochondrial biogenesis [BR:
hoc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
132815056
Cytoskeleton proteins [BR:
hoc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
132815056
Exosome [BR:
hoc04147
]
Exosomal proteins
Proteins found in most exosomes
132815056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
132815056
NCBI-ProteinID:
XP_060679721
LinkDB
All DBs
Position
4:106387238..106403932
Genome browser
AA seq
376 aa
AA seq
DB search
MGDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGKLRHEGVMVGMGQKECYVGDEAQ
NKRGILTLKYPIEHGIVTSWNDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYIYIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILQLD
LAGRDLTDYLIKILTEHGYSFTTTAEREIVRDIKENLCYMALDFESEMAVAASSSTLEKS
YELPDGQVITIGNERFRCPEALFQPSFLGMETTGIHEAAFHSTMKCDTDIRKDLYASVVL
SGGSTMFPGFANRVQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIIK
QRYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgaggagattgcagctctggttgtggataatgggtctgggatgtgtaaggct
gggtttgcaggggatgatgctcctagagcagtgttcccttccatcgtggggaagcttcga
catgagggagtgatggttggaatgggtcagaaggagtgttatgttggtgatgaagcccag
aacaagagagggattctgaccctgaagtatccaattgagcatgggattgtgaccagctgg
aatgacatggagaaaatctggcatcacactttctacaatgagctgcgagttgccccagag
gaacatcctgtcctcctcacagaggcacctctcaatcccaaagctaatcgggagaagatg
actcagattatgtttgagacctttaacacaccggctatgtatatctacattcaggctgtc
ctgtccttgtatgcttctggccgcactacaggtattgtaatggactctggtgatggtgtt
actcacactgtacctatttatgagggatatgccttgccccatgccattctgcaactagac
ctggctggcagagacctgactgactacctgataaagattctgactgaacatgggtactca
ttcacaaccacagctgaaagggagattgtccgtgacatcaaagagaatctatgctacatg
gctcttgactttgagtctgagatggctgtagctgcctcctcttcaactctagagaaaagc
tatgagctaccagatggtcaagtcatcaccattggcaatgaacgtttcagatgtccagag
gctctcttccaaccttccttcctagggatggaaacaactggaatccatgaagctgccttc
cacagcaccatgaaatgtgacacagacatcaggaaagatctgtatgctagtgttgtctta
tcgggtggatccaccatgtttccaggctttgcaaatagagtgcagaaggaaatcacagcc
ttggcgccaagcacaatgaagattaaaatcattgctccacctgaaaggaagtattcagta
tggattggtggctcaatcctggcttctctctctacctttcaacaaatgtggatcatcaaa
cagcgatatgatgaatcaggtccctctatagtccatcgcaagtgcttctaa
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