Hemiscyllium ocellatum (epaulette shark): 132817610
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Entry
132817610 CDS
T09720
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04081
Hormone signaling
hoc04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
132817610 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132817610 (rapgef4a)
Membrane trafficking [BR:
hoc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
132817610 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
DUF1667
Motif
Other DBs
NCBI-GeneID:
132817610
NCBI-ProteinID:
XP_060684096
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Position
7:65410163..65655719
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AA seq
1239 aa
AA seq
DB search
MGLMLERIGWVLERVDHVLERKDLVLERMRLVLEMVDLMSERRGLVLERMDGPDVGEDGT
GIGEEDGPDVGEDGPGVGEDGPGVGEDEPSVGEDGPGVGEDGPSVGEDAPGVGEDGPGIG
DDRLGAGQNGPGVGEDLPGAGEVGPGAGGDGLGAGEDRPGVGEDGPGVGEDGPGAGMGGP
GVGEDGPGAGEGGSGAGDDGPGAGENGCGVGEEGPGAGEDGPDAGNNGPGAEEGGPGTGE
DGPGAGELRSDVGENGPGVDFQKLPHSNGAGTELEEEEDLPVSRYKRLEPGQSIEPAERS
SEDVDIIFSWLKGLKAFEKFHPTLLYQICLYGYYENLEKGVTLFRQGDLGTSWYAVLAGS
LDVKVSETANHQDAVVLCTLGIGTAFGESILDNTPRHATIVTREYSELLRIEQKDFKALW
EKYRQYMAGHLVPPYGVMETTSSNERIPEKESVSSNALCSVSKNKTAVIENRVPLHPVKT
ITQVPSEKILRAAKVLRNVILSQAPHMIRDRKYHLKTYKQCCVGTELVDWMIQQTPCVHS
RPQAVGMWQVLLEEGVMNHVDQEHSFQDKYLFYRFLDDEQEGVPPPTDEEKRECEEELQE
TMLLLSQIGPDAHMRMILRKQPGQRTVDDLEIIYEELLHIKALSRLSTTVKRELAGVLIF
ESHAKAGTVLFNQGEEGTSWYIILKGTVNVVIYGKGVVCTLQEGDDFGKLALVNDAPRAA
SIVLREDNCQFLRVDKEDFNRILCDVEANTVRLKEHGRDVLVLEKIPMGSRPSNQGSTQT
QYKYTVMAGTPEKILEHFLETIRPDLPANGMTGVPPPWSLTERKGEAFLTDPCLDDFVLL
HCIFMPHSQLYPALMAHYHAEALQGTEQEKLDYALSNKRRVIRLVLHWAKVHTDLLQEED
SAVAFLEEFYVSVSDDSRMIPALKEQLPELEKLVKQNSEEGNGKASQKKHKVILRQFSIG
EDRLQKRQPIRSTDESKFKTPLPEQEGPSTGTMATFELMSSKDLAYQITIYDWELFNCVY
ELELIYHTFGRHHFKKTTANLDLFLRRFNEIQFWVVTEICLCSQLSKRVQLLKKFIKIAA
HCKEYRNLNSFFALVMGLSNVAVSRLSQTWEKLPSKFKKIYSEFESLMDPSRNHRAYRLT
VAKLEPPIIPFMPLLIKDMTFTHEGNNTLRDSLINFEKMHMIGNSVRTARHCRSQPFNPD
SSLANKNHQDVRVYVRQLNVIDNQRTLSQLSHKLEPRRS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgggccttatgctggagaggatcggctgggtgctggagagggtggaccacgtattggag
aggaaggacttggtgctggagaggatgcgcctggtgttggagatggtggacctgatgtca
gagaggaggggcctggtgctggagaggatggatgggcctgatgttggagaggatggaact
ggtattggagaagaggatgggcctgatgttggagaggatggacctggtgttggagaggat
gggcctggtgttggagaggatgaacctagtgttggagaggatgggcctggtgttggagag
gatggccctagtgttggagaggatgcgcctggtgttggagaggatgggcctggaattgga
gatgataggcttggtgctggacagaatggacctggtgttggagaggatttgcctggggct
ggagaggttggacctggtgctggaggggatgggcttggtgctggtgaggatagacctggt
gttggagaagatggacctggtgttggagaggatggacctggtgctggaatgggtggacct
ggtgttggagaggatgggcctggtgctggagagggtggatctggtgctggggatgatggg
cctggtgctggagagaatggatgtggtgttggagaggaggggcctggtgctggggaggat
gggcctgatgctggaaacaatgggcctggggctgaagagggaggacctggtactggagag
gatggacctggtgctggagagcttagatctgatgttggagagaatggacctggtgttgat
tttcaaaaactgccacatagtaatggtgcaggaacagaattggaagaggaagaggatctg
cctgtcagtagatacaagcgattggagccggggcagagcatagaacctgcagagcgttct
agtgaagacgttgacattatattcagctggctcaaaggactgaaggcatttgagaaattc
catcccaccctcttgtaccagatctgcttatatgggtactatgaaaatctggagaaaggt
gtcacgttgtttcgacaaggagaccttgggacaagttggtatgcagtactcgctggatcc
ctggatgttaaggtgtcagaaacagctaaccaccaggatgctgttgtactgtgcactctc
ggaattggaacagcatttggagaatccattctggacaatactcctcgccatgcaacaatt
gttactagggagtacagcgaacttctccgtattgaacagaaagacttcaaagcactttgg
gagaaatatcgacagtacatggcaggacatttggtccctccctatggtgttatggaaact
acatctagtaatgagcgaatccctgaaaaggagagtgtgagcagcaatgcactgtgttct
gtgtcaaaaaacaagacagcagttattgaaaatcgtgtccctctacatccagttaaaacc
attactcaggttccatctgaaaaaatccttagagctgcaaaggttttacgaaatgtgata
ctatcccaggcacctcacatgattagagaccggaaataccacctgaagacctacaagcag
tgctgtgttggcacagaattggtggactggatgatccaacagacaccttgtgttcattcc
cgcccacaagctgtaggcatgtggcaggtgctgcttgaggaaggagtcatgaaccacgtg
gaccaagagcacagtttccaggacaaatacctgttttatcggttcttggatgatgaacag
gagggtgtccctccacccacagatgaggagaaaagagagtgtgaggaggagctacaagaa
accatgcttctcctttctcagattgggccagatgcgcacatgagaatgattttacgcaaa
cagccaggccagagaacagttgatgatttagaaatcatatatgaagaattgctacacatt
aaagccttgtctcgactctctaccacagtaaagcgagagcttgctggtgttttgatattt
gaatctcatgccaaagcagggacagtgttgtttaatcaaggagaagagggcacttcgtgg
tatattatcctcaagggcacagtgaatgttgttatctatggcaagggagtagtctgtaca
ttacaggaaggagatgattttggaaagttggctttggtgaacgatgctccaagagcagcc
tccatagtacttcgtgaggataattgccagtttctacgtgtagataaagaagattttaac
agaatcctttgcgatgttgaggccaatacagtgagactcaaagaacatggacgagacgtt
ttggttttggagaaaataccaatgggtagcagaccttccaatcagggaagcacacagaca
caatacaaatacacagtgatggcagggactcctgaaaaaatattagagcactttctggaa
actatacgccctgatttgcctgctaatggaatgacaggtgtccctccaccatggtccctg
acagagagaaagggtgaggcttttttgacagatccatgccttgatgactttgttctgttg
cactgcatttttatgccacacagccagctttacccagctctaatggctcattaccatgca
gaagcattacaaggtacagaacaagagaagcttgactatgccctcagtaacaagagacgg
gtcatccgccttgtcctacactgggcaaaggtacatacagatctcttacaagaagaagac
agtgctgttgcatttcttgaagaattttatgtgtcagtgtccgatgactcacggatgatt
cctgctttgaaggaacagctcccagaattagagaaactggtaaaacagaactccgaagaa
ggaaatggcaaggcatcacaaaaaaagcacaaagttattttgcgtcagttcagcattggt
gaggatagactccaaaagagacaaccaatacgaagtacagatgaaagtaagttcaaaaca
ccactgccagaacaggagggcccatccactggaactatggcaacttttgagttaatgagt
tctaaagatctagcctaccagattacaatttatgactgggagttgttcaactgtgtatat
gagctggaattgatttatcacacatttggaagacatcatttcaagaaaactactgccaac
ctagatctatttcttcgaagattcaatgaaattcagttctgggttgtaacagaaatctgc
ctatgttctcagctcagcaaaagagtacaacttctgaagaagtttatcaagattgcagct
cattgcaaagagtatagaaatttgaactccttttttgcgctggtaatgggactgagcaat
gtagctgttagccgtctctctcagacctgggagaaacttcccagtaaattcaagaaaatc
tattcggaatttgaaagcttaatggatccttccaggaaccatagggcatacagacttaca
gtagctaaactggagccaccaatcattcccttcatgcctttacttataaaagacatgaca
tttacccatgaaggcaacaatacactcagggatagccttatcaattttgaaaaaatgcat
atgattggcaactcagtaaggacagccagacactgcagaagtcagcccttcaatccagat
tcatcacttgcaaacaagaaccatcaggatgtccgtgtatatgttcgacagcttaatgta
attgacaatcagagaactttatcacagttgtctcacaagttggaaccacggcgatcctaa
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