Hemiscyllium ocellatum (epaulette shark): 132817941
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Entry
132817941 CDS
T09720
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04620
Toll-like receptor signaling pathway
hoc04621
NOD-like receptor signaling pathway
hoc04622
RIG-I-like receptor signaling pathway
hoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
132817941 (traf3)
04621 NOD-like receptor signaling pathway
132817941 (traf3)
04622 RIG-I-like receptor signaling pathway
132817941 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132817941 (traf3)
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Sina_ZnF
zf-C3HC4
zf-C3HC4_2
zf-TRAF_2
Tsc35
zf-rbx1
zf-RING_6
Fez1
Motif
Other DBs
NCBI-GeneID:
132817941
NCBI-ProteinID:
XP_060684475
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Position
8:complement(77821623..77905522)
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AA seq
588 aa
AA seq
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MAAMNQRSGRPLAMATARNIESSAPQLSLMQQTNVANVPNSRLSSLSIEPDDGGFKEKFV
LKLENKYKCEYCHLALCNPKQTECGHRFCESCVRKIIGSPKPVCPVDNVPLFENTIFKDI
CCKKEVLALHVFCRNEINGCKKQLPLGNLEGHLLECPHQEVRCARRGCTEMVQRKDLADH
LNSSCKYREQTCKYCRTEVAIAELKKHEEFDCPSFPVPCPNKCNARILRGELNSHQLQCL
NVVMTCPFSKYGCNFQGTNQQLKMHDADSMAQHLNSVLMKNGDLENTIFELQNKLQEKSK
MIDIMSAQISHLEKEQSKLAQLATKNESRLGYMQKMLASQTDKLMNIDQASQQTYQKQEE
SVREVKTLEESVDKLQIQLRQLELAGRAGGMATGPANLSALDNQVKRHGSLLSVHDVRLA
DMDLRFQVLETASYNGKLIWKIRDYARRKQEAVSGKTLSLYSQPFYTGYFGYKMCARVYL
NGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLLDQAPTKSHLGDAFKPDPNSSS
FKKPVGEMNIASGCPLFVAQTVLENGTYIKDDTIFIKVVVDTSDLPDP
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaatgaatcagagatctggacggccattggccatggcaactgcaagaaacata
gagtcatcggctccgcaactttccctgatgcagcagaccaatgtggctaatgttccaaat
agcaggctgtcatctctaagcattgaaccagacgatgggggctttaaggagaagtttgta
ctgaagctggaaaacaagtacaaatgtgaatattgtcatcttgcattgtgcaatcccaaa
cagactgaatgtggccacagattctgtgaaagttgtgtaaggaaaatcattgggagtccg
aaaccagtttgtccagtcgataatgtgcctttatttgagaatacgattttcaaggacatc
tgctgtaaaaaagaggttcttgcacttcacgtcttctgtaggaatgagataaatggctgc
aagaaacagctacctcttggaaatcttgagggtcacttacttgaatgtcctcaccaggaa
gttcgctgtgcacgcaggggatgcacagaaatggtgcaaaggaaagatctagctgaccat
ttaaattcaagctgtaaatatcgggagcaaacctgtaaatactgcaggactgaagttgct
attgctgagttaaaaaaacatgaagaatttgactgtccgtcgttcccagtgccatgtccc
aataagtgcaatgctcgtattctgaggggagagttaaatagtcatcagttgcaatgtctc
aatgtggtcatgacttgccctttctctaagtatggatgcaacttccaaggaaccaaccag
caacttaaaatgcatgacgctgatagtatggctcaacatttgaactctgtgttgatgaag
aatggagatctcgaaaatacgatttttgagcttcagaacaagttgcaggaaaagtctaaa
atgattgatattatgtcagctcagataagccacttggagaaggagcagagtaaattagca
cagcttgcaaccaaaaatgaaagtcgacttggatacatgcagaaaatgttagctagtcag
acagataaactgatgaatattgatcaagcatcacaacagacttatcagaagcaggaggag
tctgtgagagaggtgaaaactttggaagaatctgtagacaagctccaaatccaactccga
cagctggaactagcgggcagagctggtgggatggccacaggaccagcaaacctgagtgca
ttggataaccaagtaaaaagacatggcagccttctcagtgtacatgatgtgcgcttagca
gatatggacctacgctttcaagtgctcgaaacggcaagctacaatggaaaactaatttgg
aaaatccgagattatgcacgccgaaaacaggaagctgttagtggaaaaacattgtccttg
tatagccagccattttacactggatattttggctataagatgtgtgctcgggtttacctc
aatggagatggcatgggcaaaggaactcacttgtcgctgttctttgtcgttatgcgggga
gaatatgatgcactgttaccgtggccttttaaacagaaagtaactttgatgttattagat
caagcaccgacaaaaagccatttaggtgatgcctttaagccagatcccaacagtagtagt
tttaagaaaccagtgggagagatgaatattgcttcaggctgcccactctttgttgcacag
actgttttggaaaatgggacgtatattaaagatgacactatcttcataaaagtagttgtt
gatacctcagatttaccagatccatga
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