Hemiscyllium ocellatum (epaulette shark): 132818404
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Entry
132818404 CDS
T09720
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc02010
ABC transporters
hoc04146
Peroxisome
hoc04977
Vitamin digestion and absorption
hoc04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132818404 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
132818404 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
132818404 (abcd4)
04980 Cobalamin transport and metabolism
132818404 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132818404 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoc02000
]
132818404 (abcd4)
Enzymes [BR:
hoc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
132818404 (abcd4)
Membrane trafficking [BR:
hoc04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
132818404 (abcd4)
Transporters [BR:
hoc02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
132818404 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
DEAD
T2SSE
AAA_22
Mg_chelatase
AAA_29
NACHT
bpMoxR
FtsK_SpoIIIE
nSTAND3
AAA_19
AAA_18
nSTAND_NTPase5
Zeta_toxin
AAA_23
TsaE
AAA_7
cobW
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
132818404
NCBI-ProteinID:
XP_060685381
LinkDB
All DBs
Position
8:103357720..103403731
Genome browser
AA seq
613 aa
AA seq
DB search
MSGSRRQGRPPEPRGSRPKLDLLFVRRFCHIQAILFPSWTSQSVLMFATLLFVVLLEQLI
IYQVGIIPSHFFKVLGEKDVVGFRQITIVASCLIVANSLLKSFDQFISSLMYVHWRQTLT
MDLHKAYFKKKVYYTLNVLHAELDNPDQRISQDVERFCKGMSKMASNLIISPFTLAYYTY
QCFYSTGWLGPISIFIYFFIGSVANKILMEPIVSTLVQQEKLEGDFRFKHMQIRVNAESA
AFYRAGRVEHMRTNWKLQDLLQTQRELMKRELWLYIGVNIFDYLGSIISYIIIAIPIFSG
RYDGLAPAALVELVSKNAFVSMYLIHCFSQLIDLSTTVSDLAGYTHRIGELQEMVLKLCK
SQCKSRQPSCKELSGFDKDSLDSEEEDEEDSGDVAFILEQVSFTALSSKEVLVENLTLTV
IAGHNLLVTGNTGSGKTTLLRVLNRLWETAHGSVHMLTSFGPRGVMFFPQKPYFTDGTLR
EQVIYPLKEIYPVTGLPDDERIIRFLTLTGLGSLLKRTGGLDERVDWNWYDVLSPGEMQR
LCFTRLFYHQPKYAVLDEATSALTEETERELYHTCKQLGMTVISVGHRSSLEKHHDSMLF
LFGDGKWELTKIH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggtccaggcggcagggccggcccccggagccgagaggcagcagaccaaagctg
gaccttctgtttgtcagacgattctgccatatccaggcaattcttttcccatcttggaca
tcgcagagtgttctgatgtttgctacactgctgtttgttgtcctcctcgagcagctgata
atctatcaggtaggaattattccaagccacttcttcaaggttctgggtgagaaagatgtt
gttggcttcagacaaatcactattgtagccagctgcctcattgtggccaactctctgttg
aaaagtttcgaccagttcatctcaagtttgatgtatgtacattggagacagactctgacc
atggacctccacaaggcctacttcaagaagaaagtctattacacccttaacgtactccat
gctgagttggataatccggaccagcgtatcagccaagatgtggagaggttttgcaaaggg
atgagcaaaatggccagcaacctcatcatctccccattcaccctggcttattacacctac
caatgcttttacagtacaggctggctgggtccaatcagcatcttcatttacttcttcatc
ggttcagtggccaataaaattctaatggagccaattgtctcaaccctggtccagcaggag
aagctggagggagacttcaggttcaagcacatgcagatccgtgttaatgccgagtcagct
gcgttctacagagcaggaagagtggagcacatgaggacaaactggaaactgcaggaccta
ctccaaacacagagagagctgatgaagagggagctgtggctgtacatcggtgtgaacatt
tttgattacctgggcagtatcatcagttacatcatcatagcgatccccatttttagtgga
cggtacgatggtcttgctcctgcagcccttgtcgagctggtcagtaagaatgcctttgtg
tccatgtatctgatacactgcttcagccaactcattgacctctcgacaaccgtatctgac
cttgcaggctacacacacagaattggagagctgcaagagatggtcctcaaactctgcaaa
tcacaatgtaagagcagacagccatcatgcaaggaattgtcaggttttgacaaggacagt
ttagattcagaagaggaggacgaggaagattctggtgatgtggcctttatcttggagcag
gtctcctttactgcactgtcctccaaggaggtgctagtggaaaacctaaccctgacagtc
atcgcggggcacaacctcttggtaacgggcaacactggctctggaaagaccactctgtta
cgggtcctgaatagactgtgggagacagctcacgggtctgtccacatgctgacttccttt
gggccccgtggagttatgttttttccccagaagccatacttcactgatggaactctgcga
gaacaggtaatttatcctttgaaggaaatctacccagttacaggtttaccagatgacgag
agaatcatccgcttcttaacattgaccggattggggtcactcctgaagaggactggtggt
ctggatgagagagtggattggaactggtacgatgtgctgtctcctggagaaatgcagaga
ctgtgcttcactcgactcttctatcaccagcccaaatatgcagtgttagatgaagctaca
agtgcactgacagaggagaccgaaagagagctgtaccacacctgcaagcagctgggcatg
actgtcatcagtgtgggtcaccgcagcagcttggagaagcaccatgactccatgttattc
ctgtttggagatgggaaatgggagctgactaaaatccactaa
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