Hemiscyllium ocellatum (epaulette shark): 132819679
Help
Entry
132819679 CDS
T09720
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132819679 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hoc04990
]
132819679 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
hoc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
132819679 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
EGF_MSP1_1
EGF_TEN
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
132819679
NCBI-ProteinID:
XP_060687305
LinkDB
All DBs
Position
10:complement(20506352..20878315)
Genome browser
AA seq
1680 aa
AA seq
DB search
MEWVRYSVLVWLLSVLQPHQVCPEKRNLRRITYVLHSGKSHGRGSVFAFGTRHRAPSSYT
VRAQGSAPVLEVKTTYRRSSPQVRTRRMGQASQHVQQQQQQQHIAQFHPHQYYQQQSIRH
PVHYQKQQLNGVNVCGGQCCHGWAQAPGSQRCTKPNCSPKCQNGGMCLRPQLCVCKPGTK
GKACEETSSSVQPTNNQDTVAQAQPIPQQAPQQTMTQRLVQPPQKINSLGHMSLTVKQKP
SMVVPQQSHMVPLPSQPLMMLVQRGQSQQFTFKPKYYSQKFYPGGQAAGSSLPQASSGSQ
FQVGNHTGRIKVVFTPTICKVTCIKGKCHNSCQQGNTTTLISENGHAADTLTAQNFRVVV
CHLPCMNGGQCTSRNKCQCSPHFTGKLCHIPVQPSNGQQHHQQPGKAPTSPVVHSTHTLP
LSHGGKPGLQMKFPPNIVNIHVKHPPEANVQIHQVSRVDSSSLGQKVNGVKSSQQQITYH
ALSPSVPHVPNSVYTHQQQVRTHHFPRTQTKLGRCFQETTGTQCGKPLPGLSKQEDCCGT
VGTSWGFNKCQKCPKKPSFPIRGNGQVVECPVGYKQVNATHCQDINECQLQGVCLHGECL
NTLGSYRCTCQPGFVPGPAQSACVPENLLIEEKGPCYRFVSAGKQCMHPLSVQLSKQMCC
CSVGKAWGTNCEKCPILGTAAFKQICPGGMGYHVSQTFKKVTIKPGSETKVQKRPDSTMT
HPEIKHSDPIPTPAKIPPEQQPLESFPSTETQQPAVLIPEVATSTPEQELVKDERVVESG
LPQLSPSITTIQINSGYPAVVEKTSPPNPVHIAPDVSTSSLTHFIASTQVAEIDECSVDP
RICGPGQCINLPEGYTCNCDPGYQLNTVKTACIDVDECAQIPRPCSNGYCKNTVGSFRCL
CHRGFTSDGGTECADIDECLSPSICGEGHCINVVGSYRCQFCDAGYKMNRGQCEDVDECQ
DSNKCPSGRCINNPGSYECVSCPDGYTGRNGQCVDVNECLNRSACANGRCSNLEGTYICT
CNRGYEPSPDGKLCKDVNECQDAILCTNGQCTNTEASFFCECNLGYRLTATGDQCEDIDE
CQQNSDTCQGGVCVNNAGSFSCTCPGGFQLVNGVRCQDVDECADGTKCHDGSCVNTDGSY
RCECARGYRLNPTGEACADVDECANSTVCGTHGFCENTAGSFRCLCDQGFQDLLEGQGCV
DINECEMISGVCGEALCENVDGTFLCICPDDVQEFDPMTGECHSPEPPAEGKKECYYNLN
DVHFCDNVLASNVTKQECCCTLGAGWGDNCEVFPCPMFGTPEFAAMCPEGKGFIPNGDSA
YGISGQNYKDADECVLFGQEICKDGFCLNTQPSFECYCRQGLYYDPVKLQCLDIDECQDV
ASCINGQCLNTEGSYNCFCTLPMVLDASGKRCTQPLDSDDIDECQDPSNCIGGQCINTDG
SYNCFCTYPMILDSSGKRCIEPPETSEQTTEEDVCWQAVSSEVVCGSPLVDRRTTYTECC
CMYGEAWGMDCALCPLRNTDDYARLCNLPVPGRRHEYGQDALMPPYQPDYSVPASEYHSQ
QALRGNLPFFVDAHYPFDSFEGLQAEECGILNGCENGRCVRVQEGYTCDCYDGYQLDISK
LECVDVNECIELNDKMSLCRNAKCINTDGSYKCVCLPGYVPSEQPNYCVTTEAQKESKLE
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggtgaggtacagcgttttggtgtggctactctccgtcttgcagccgcaccaa
gtgtgccctgagaagaggaatctcaggaggatcacttacgtgcttcactcgggcaagtct
cacggccggggcagtgtctttgctttcggtaccaggcaccgtgctccctcctcctacaca
gtcagggcgcagggctcggcaccggtgctggaggtgaaaaccacttacaggaggagctcg
ccccaggtcaggacccggcggatgggccaggcgagccagcacgtccagcaacagcagcag
cagcagcacatcgctcagttccatccacaccagtactaccagcagcagtccattagacac
cctgtgcactaccaaaaacaacagcttaacggagttaatgtttgtggcggtcagtgctgt
catggatgggcccaagctcctggctctcaaagatgcaccaagccgaattgttctccaaag
tgccaaaatggagggatgtgtctaagaccccagctttgcgtgtgtaagccaggcaccaaa
ggtaaagcatgcgaggagacgtcgtccagcgttcaacccacaaacaatcaagacacggtg
gcccaggctcagcccatcccgcaacaggcgccccagcaaaccatgacccagagattggtg
cagcctcctcagaagatcaattcgctgggccacatgtctttgactgtcaagcagaaacct
tccatggtggtgccccagcagtctcacatggtaccccttccatcgcaaccactgatgatg
cttgtgcaacggggccaatctcaacaattcacgtttaaacccaaatattacagccagaag
ttttatcctggaggacaggctgcaggaagttcgctgcctcaggcttcatctgggagccag
ttccaagtcggaaaccacaccggccgcatcaaggtggtcttcacccccaccatctgcaaa
gtgacctgcatcaaaggcaagtgccataacagctgccaacagggcaacaccaccaccctc
atcagcgagaacgggcatgctgctgacactctgacagcgcagaacttccgtgtggtggtc
tgccacttgccctgcatgaacggaggacagtgcacttccaggaacaaatgccagtgctct
cctcattttaccggcaagctctgccatatcccagtgcagccttccaatggccagcagcat
caccagcagcctggcaaagctccgacctcgccagtagttcattcaacacacacactgcct
ctgtctcacggtgggaagcccggcctacagatgaagttccctccaaacatcgtgaacatc
catgttaaacacccaccggaggcaaatgtgcagatccaccaggtctccagagtggacagt
tcttccttgggacagaaggtcaatggtgtcaagtcaagccaacaacagatcacttatcat
gctctgagtccttcagtccctcacgtaccgaattctgtgtacacacaccagcagcaagtt
cgcacccatcattttccccgaacacaaaccaagttaggacgttgcttccaggaaactaca
ggtacacagtgtgggaaacctcttcctggcctttcaaagcaagaagattgctgtggaact
gtggggacttcttggggtttcaacaaatgccagaaatgtcctaagaagccatctttcccc
attcgagggaatggacaagtggtggagtgtcccgtgggttacaagcaggttaatgcaaca
cattgtcaggatatcaatgaatgccaactccaaggggtgtgcttacatggagaatgcctg
aataccctgggcagctataggtgcacatgccagcctgggtttgttccaggtcctgcacaa
tctgcctgtgtccctgaaaatcttttaattgaagagaaagggccctgctaccggtttgtc
agtgcaggaaagcagtgcatgcatcctctgtctgtgcagctcagcaagcagatgtgctgt
tgcagcgttggcaaggcctggggcacaaactgcgagaaatgtcccattctgggaacagct
gccttcaagcaaatctgccctggtggaatgggctaccatgttagtcaaaccttcaagaag
gtgactatcaagcctgggtctgaaactaaagtgcagaagcgtcctgactcgaccatgact
catcccgagattaaacactctgatccgatacctactccggcaaagataccaccagaacaa
cagcccttagaatctttcccatcaaccgagactcaacagccagcggtgttaataccagaa
gtggctaccagcacacctgaacaggaacttgtaaaagatgagcgtgttgtggaatctggc
ctgccccagctatcgcccagcattaccaccatccagatcaactcgggctaccctgcagtg
gtggaaaaaacctcacccccgaacccggtccacattgccccagatgtgtccacctccagt
ctgacccatttcattgcatctactcaagtcgcagaaattgatgagtgctcggttgatcct
cggatctgtggacccggacaatgcatcaatctaccagagggatacacgtgtaactgtgat
cctggctaccagctcaacacagtgaaaactgcttgcattgatgtggatgaatgtgcacag
attccgcgtccgtgttccaatggatactgtaagaacacagtaggaagcttccgctgcctc
tgtcatcgagggttcacatcagacggaggaacagaatgcgctgatattgacgagtgcctg
agccccagtatctgtggagaaggtcattgcattaatgttgtaggctcctacagatgccag
ttctgtgatgctggatacaaaatgaacagaggacagtgtgaagacgttgatgaatgccag
gattccaacaaatgtccgtctggaagatgcattaacaatcctggctcttatgagtgtgtg
tcttgcccagatggatacacaggcagaaatggccaatgcgtagatgttaacgaatgcctc
aacagatcagcttgtgcaaatggcagatgttcgaaccttgaggggacttatatctgtacc
tgtaaccgaggctatgaaccatcccctgatggcaaactgtgcaaagatgtgaatgagtgt
caagatgcgattctgtgcaccaatgggcaatgcacgaatacagaggcctccttcttctgc
gaatgcaacttgggttaccgtctgactgccacaggggaccagtgtgaagacattgacgaa
tgccaacaaaactcggatacttgccagggaggtgtgtgcgtcaacaatgctggctccttt
tcatgcacgtgtccaggtggcttccagctggtgaatggtgttaggtgccaagatgttgac
gaatgcgcagatggcaccaaatgccatgatggatcttgtgtcaacaccgacggctcctat
agatgtgaatgtgccagaggctatcgtttgaaccctactggtgaagcatgtgctgatgtc
gacgaatgtgcaaacagcacggtgtgcggcactcatggattctgtgaaaacacagctggg
tccttccgctgtctctgtgaccagggcttccaggatctactggaggggcaaggctgtgtg
gatataaacgagtgtgaaatgatcagcggagtttgtggtgaagctctctgtgagaatgtg
gatggcacattcctttgcatctgtccagatgatgtccaggaatttgacccaatgaccggg
gagtgccactcccctgagcctccagcggaagggaaaaaggaatgttactacaatctcaat
gatgtccacttctgtgacaatgtcctggcttccaacgtcaccaaacaagaatgttgctgc
acactgggagctggctggggtgacaactgtgaagtgtttccatgcccaatgtttggcact
cctgaattcgctgccatgtgccctgagggcaagggcttcattcctaatggagactcagcc
tatggaatcagtggacaaaactacaaagatgctgatgaatgtgttttatttggacaagag
atctgtaaggatggcttttgcctgaacacacagcccagctttgaatgttactgcagacaa
ggcttgtattatgatccagtcaaactgcaatgtcttgatatcgacgaatgccaggatgta
gcgagttgcataaatgggcagtgccttaacactgaaggttcgtacaactgtttctgcacc
ctcccgatggtcctggatgcttcagggaaacgctgcacgcagcccttagattctgacgat
atcgacgagtgtcaggatccatcaaattgtatcggtggtcaatgcatcaacactgacggc
tcatacaactgtttctgcacatacccaatgatcctcgactcttcagggaagcgttgcatt
gagcctccagaaactagtgaacaaaccactgaagaggatgtgtgctggcaggctgtgagc
agtgaggttgtgtgtgggtcacccctagtggatcggaggaccacctacactgagtgctgc
tgtatgtatggagaagcctggggtatggactgtgctctttgtccccttcgaaacacagat
gactacgcacgactttgtaaccttcctgttcctgggagacgacatgagtatggtcaggat
gcattgatgcctccgtaccagcctgactactcagtcccagcctctgagtaccactcccag
caggcactacgtggtaacctgcccttctttgtcgacgcacactatccgtttgatagtttc
gagggactgcaggctgaggaatgcggtatcctgaatggctgtgagaatgggcgttgtgtc
agagtgcaggagggctacacgtgtgactgctatgatggctaccagctggacatcagtaag
ctggagtgtgttgacgtgaatgaatgtatcgagctcaatgataaaatgtcactttgccgg
aacgccaaatgcatcaacactgatggatcgtacaagtgtgtgtgtctgccaggctacgtc
ccctcggagcagcctaattactgcgtaactacagaggcacagaaagagtcaaagttggag
taa
DBGET
integrated database retrieval system
